ID J9IPA3_9SPIT Unreviewed; 504 AA.
AC J9IPA3;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 13-SEP-2023, entry version 31.
DE SubName: Full=TPR Domain containing protein {ECO:0000313|EMBL:EJY73870.1};
GN ORFNames=OXYTRI_04877 {ECO:0000313|EMBL:EJY73870.1};
OS Oxytricha trifallax.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY73870.1};
RN [1] {ECO:0000313|EMBL:EJY73870.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JRB310 {ECO:0000313|EMBL:EJY73870.1};
RX PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT with 16,000 Tiny Chromosomes.";
RL PLoS Biol. 11:E1001473-E1001473(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJY73870.1}.
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DR EMBL; AMCR01013810; EJY73870.1; -; Genomic_DNA.
DR AlphaFoldDB; J9IPA3; -.
DR EnsemblProtists; EJY73870; EJY73870; OXYTRI_04877.
DR OrthoDB; 5616233at2759; -.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.1040; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR044650; SRFR1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44749; SUPPRESSOR OF RPS4-RLD 1; 1.
DR PANTHER; PTHR44749:SF1; SUPPRESSOR OF RPS4-RLD 1; 1.
DR Pfam; PF13174; TPR_6; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 3.
PE 4: Predicted;
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 246..279
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 280..313
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 382..415
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 504 AA; 58071 MW; 5D30FB145CDE2260 CRC64;
MNSQGKDQFQ IDTGANEINK QSQQINISLD DQSSDQIQTD AIIVQKQKQD IQSARNQESS
KDPQQDQYFH DIARESHFTT SVNDSSIIDQ NTSFQFESLM GEDLRMDKNL KSNLVFKKSI
GDLKEMNYAQ SQHKDIDFND EDLLNNEAQN AQEKGNSFPQ NVKIVKSDKK ASNNIFGNRR
SISKAKTTEV QNQIHSIQDL LDRNQDLAKK ERNFEKQCQT LIKHQKWEEL DKVSTDHLEE
THGISFKGFF YLGISFYKIQ DYHNAIRAFQ KAELINGDDS QLQYSLGLAN FKIEQYNQAV
DHLKKCTQID PKHPFAYNNL AFLYNMHQYY HQTITVCGLA KQNNPDKHNC YRHWAFALYK
MGKMAKAVKK IKKGIQKNSR DPENWIIWGL ILRTVGNYAS AKHKFKRALK YDKSNQTALE
ELKMLEKIIE IDKTLPLEQV PSVSKRANTN RSLKKQADDF DLGIESGKAI NTEQKLINNL
SSACTRSCSN ARSCNSNHNN CTIF
//
