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Database: UniProt
Entry: J9J1L3_9SPIT
LinkDB: J9J1L3_9SPIT
Original site: J9J1L3_9SPIT 
ID   J9J1L3_9SPIT            Unreviewed;      1245 AA.
AC   J9J1L3;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   30-AUG-2017, entry version 31.
DE   SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:EJY79095.1};
GN   ORFNames=OXYTRI_23738 {ECO:0000313|EMBL:EJY79095.1};
OS   Oxytricha trifallax.
OC   Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX   NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY79095.1, ECO:0000313|Proteomes:UP000006077};
RN   [1] {ECO:0000313|EMBL:EJY79095.1, ECO:0000313|Proteomes:UP000006077}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SB310 {ECO:0000313|Proteomes:UP000006077};
RX   PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA   Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA   Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S.,
RA   Fulton R.S., Ly A., McGrath S., Haub K., Wiggins J.L., Storton D.,
RA   Matese J.C., Parsons L., Chang W.J., Bowen M.S., Stover N.A.,
RA   Jones T.A., Eddy S.R., Herrick G.A., Doak T.G., Wilson R.K.,
RA   Mardis E.R., Landweber L.F.;
RT   "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic
RT   Genome with 16,000 Tiny Chromosomes.";
RL   PLoS Biol. 11:E1001473-E1001473(2013).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:EJY79095.1}.
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DR   EMBL; AMCR01009010; EJY79095.1; -; Genomic_DNA.
DR   ProteinModelPortal; J9J1L3; -.
DR   EnsemblProtists; EJY79095; EJY79095; OXYTRI_23738.
DR   Proteomes; UP000006077; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   Gene3D; 2.130.10.10; -; 3.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR011044; Quino_amine_DH_bsu.
DR   InterPro; IPR024862; TRPV.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR   InterPro; IPR017986; WD40_repeat_dom.
DR   PANTHER; PTHR10582; PTHR10582; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   SUPFAM; SSF50969; SSF50969; 2.
DR   SUPFAM; SSF50978; SSF50978; 2.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006077};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006077};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    941    960       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    966    988       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1000   1020       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1032   1052       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1064   1083       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1117   1141       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      947   1153       Ion_trans. {ECO:0000259|Pfam:PF00520}.
SQ   SEQUENCE   1245 AA;  143360 MW;  AAFC21C812A8E3E7 CRC64;
     MVKTQKTVGT SSFLKPAPQR PYAIKSHLPA TSYFDHYYNK DQVKKVDKQP YIGDTSVAVK
     NGRELLRGRR LRKINVIDEK LSPSQNMCSY QTDKLVVGDN QGRIYIFNYL TREKRSWNDL
     NSRIMQLKMK GHKLMVTAEK GFAIYDIEDF YENHNRDFPL LMYQEFGKKA YGLDVIQNAQ
     EDEDIAFFGN LEGDVKTIGI NDLQLKSEHS VHEGKDPRSS FIGAINDTVF YSSNHKQELS
     YYENETHTKL LTKNKKVKTQ GMILFQQKCV VALYNEKEQK SSFSVFEGEH LIKSEDLTFL
     GNVSGLSASF NQEFFAFAGD EGVAIYDESL NLIYFLRTEF EAKKVLYSEN DEWLIILDKE
     GNIRVIDWKQ KEEPIQLEDE KIFNAVSARN GQIFALNNFE NKVNVYNSKN KTKLQSFGPM
     REDLFYQTMK FSSDSKLLVI AYGLDKDYEI QVIKVDESSA SGETQFANTA DITDIRSVDA
     NEELQEVYIV HGPFWQYNLS ILTFSGELKE TIPSIRAFAM SPDNSIQILS HEVNKIEIRD
     PRTGKIIDEI QHDDVASAIE FYSDSKKFVL LCEETVKAYD ILTHNVIFEI ERIPAPWSQL
     QFLQSEDMIA FEDDDNQLVI YNTTTKSIEA VSEPVKKNPV YKQVIKSEPI THNTAWCFTG
     DFAIMQTASQ LLIKPIAYLS FQQSNQSFLN NGFKQFNGLF IPVAGGGPSY STASFGLLFD
     SAFQRKDDDM LKQTIYPHRL NALHWFALSA NNAAIEYCFQ IGVQFQYDIF GKNPLHFAIK
     SQDLTSINSI FKGLMLIDPK EAAEVMQSIP MNQLLHEDTP DLAELIRKVG VFTPNAQNFN
     TKLAIPKNYD MGDEVVYTTS ITPVYTLNVA NVLHPKEIDD ESEETYLIET KVITNPLPQD
     FSKASIELLD QIISVASDQV VVQDAIRIFL TRKWETYTQK FFLAQLAVYL GLLGLLIAFF
     EVENDYAIYV LGTLCMIGNS IFAFYEVLQI LIQRKSYFKD FWNWIDFTRI IIVYVCIITE
     RSEYKLSEES QAILFFMVWF KVFKYLQVFK PLRYLIKMIF ECIKVLKTFM LILITAMLAY
     AQIFDSISDE SITFVSLLRG SYVLSLGDLG DFTEYKVVQF FVFALFSFII PLVMMNLLIA
     IMSDAYAQIQ ENAKAADSRS LADMEKELEQ LVYFFTSMLR PEQSKDEYQY VFYSKRISES
     ETEAADQMQE YVEDLKNTFE QRFSKLEELI IARLPAVEAQ NQTIQ
//
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