ID J9J408_9SPIT Unreviewed; 591 AA.
AC J9J408;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=IBR domain containing protein {ECO:0000313|EMBL:EJY80370.1};
GN ORFNames=OXYTRI_22240 {ECO:0000313|EMBL:EJY80370.1};
OS Oxytricha trifallax.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY80370.1};
RN [1] {ECO:0000313|EMBL:EJY80370.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JRB310 {ECO:0000313|EMBL:EJY80370.1};
RX PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT with 16,000 Tiny Chromosomes.";
RL PLoS Biol. 11:E1001473-E1001473(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJY80370.1}.
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DR EMBL; AMCR01007815; EJY80370.1; -; Genomic_DNA.
DR AlphaFoldDB; J9J408; -.
DR EnsemblProtists; EJY80370; EJY80370; OXYTRI_22240.
DR OrthoDB; 3354811at2759; -.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:InterPro.
DR CDD; cd20335; BRcat_RBR; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR031127; E3_UB_ligase_RBR.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR044066; TRIAD_supradom.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR11685; RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR11685:SF457; TRANSLATION TERMINATION INHIBITOR PROTEIN ITT1; 1.
DR Pfam; PF01485; IBR; 1.
DR Pfam; PF17123; zf-RING_11; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51873; TRIAD; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 333..543
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 337..391
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT COILED 225..263
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 591 AA; 68753 MW; 88EB831173AB1AA1 CRC64;
MLNEIPSIQE ESAKVEMSTE SNSLQNIQPI VVNQQLANKD LNPGLEQSQF FQQLQQQMNN
NLPPSSQFIQ HNDQSHQLEQ IEDLKALIED ANDILKPFQL FLVGLLVGRS HSRILLGQAI
DLMITISQIK DENLIKHIEL EIIANPFGVD IVSITQRAQS ILVGQLQQNQ SHILSQSIVD
LGNEENDQDF NESIAIIQKE LTSLDPQFTA CVLGGEKDCP FRQQLEQSEL ARIHLETRID
QQKQKHAEII ENLQNKNVIV EDKKGDEQSI QPVPIDISQY QPAFYRYQFE EEKKQELFDL
EMAKKLQEEF KQEERKEYQN KQIPVNNVDK IVNQITCNIC LRDFKPSQQD NLEMVTLKDC
RHIFHKECIG YILDYTKSRN EIPIFNCPFP NCQKNVAKED VETYLNYFQT KVKRDGSLSS
TLEYACCPTS GCPFVYKKPI ALQGSHINPK FECPVCEAIY CLKCKKDYHF GIACKNDVDQ
EEEKFQHPQK KCPKCQYWVS RKKPNELYLF CRCTYKFCYY CSKSNSNCKC QKKINKDPMG
FYQRHNDIIN LQPYFNNPYY SDKIRDNQFG SLAKMKEGYR NTIHKKNGGL F
//
