ID K0DLB7_9BURK Unreviewed; 419 AA.
AC K0DLB7;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:AFT86911.1};
GN Name=rsmB {ECO:0000313|EMBL:AFT86911.1};
GN ORFNames=BUPH_03339 {ECO:0000313|EMBL:AFT86911.1};
OS Paraburkholderia phenoliruptrix BR3459a.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Paraburkholderia.
OX NCBI_TaxID=1229205 {ECO:0000313|EMBL:AFT86911.1, ECO:0000313|Proteomes:UP000010105};
RN [1] {ECO:0000313|EMBL:AFT86911.1, ECO:0000313|Proteomes:UP000010105}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BR3459a {ECO:0000313|EMBL:AFT86911.1,
RC ECO:0000313|Proteomes:UP000010105};
RX PubMed=23144415; DOI=10.1128/JB.01821-12;
RA de Oliveira Cunha C., Goda Zuleta L.F., Paula de Almeida L.G.,
RA Prioli Ciapina L., Lustrino Borges W., Pitard R.M., Baldani J.I.,
RA Straliotto R., de Faria S.M., Hungria M., Sousa Cavada B., Mercante F.M.,
RA Ribeiro de Vasconcelos A.T.;
RT "Complete Genome Sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a
RT Heat-Tolerant, Nitrogen-Fixing Symbiont of Mimosa flocculosa.";
RL J. Bacteriol. 194:6675-6676(2012).
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. RsmB/NOP family. {ECO:0000256|PROSITE-ProRule:PRU01023}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR EMBL; CP003863; AFT86911.1; -; Genomic_DNA.
DR RefSeq; WP_015003579.1; NC_018695.1.
DR AlphaFoldDB; K0DLB7; -.
DR STRING; 1229205.BUPH_03339; -.
DR GeneID; 27798134; -.
DR KEGG; bpx:BUPH_03339; -.
DR PATRIC; fig|1229205.11.peg.3196; -.
DR eggNOG; COG0144; Bacteria.
DR HOGENOM; CLU_005316_0_2_4; -.
DR Proteomes; UP000010105; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0001510; P:RNA methylation; IEA:InterPro.
DR CDD; cd02440; AdoMet_MTases; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR049560; MeTrfase_RsmB-F_NOP2_cat.
DR InterPro; IPR001678; MeTrfase_RsmB-F_NOP2_dom.
DR InterPro; IPR023267; RCMT.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR22807; NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR22807:SF77; SUN PROTEIN; 1.
DR Pfam; PF01189; Methyltr_RsmB-F; 1.
DR PRINTS; PR02008; RCMTFAMILY.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW ProRule:PRU01023};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU01023};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW ECO:0000256|PROSITE-ProRule:PRU01023};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW ProRule:PRU01023}.
FT DOMAIN 141..418
FT /note="SAM-dependent MTase RsmB/NOP-type"
FT /evidence="ECO:0000259|PROSITE:PS51686"
FT ACT_SITE 355
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 255
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 282
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 302
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ SEQUENCE 419 AA; 45553 MW; 1B8519B1C43B874C CRC64;
MRLHGFLIGQ TETLLAEVLR LNGPADATTS RFFRAHPKLG HGERGVIAEA VFAVLRRRME
FAHLAESGTG SPARRMALLG LMQTAGRAAL KPFVSEAESR WLDHVATIDP ESLPLRIRLN
LPDWIHQALA KRFEAAELAQ LAAALNYPAP LDLRANPMKA SRDEVLGALS KAGIEAGATP
FAPFGVRVAG KPPLTKLDAF QQGWLEVQDE GSQLLCSLVA PKRGEMIVDF CAGAGGKTLA
LGAAMRSTGR LYAFDISERR LAKLKPRLAR SGLSNVNPVL IDSEHDAKIK RLAGKIDRVL
VDAPCSGLGT LRRNPDLKWR QSPESVAELA PKQASILASA ARLVKKGGRL VYATCSILEA
ENEAVVQQFL ADHPDFALVP AREVLAEQRI DLEMGDYLSL WPHRHATDGF FAAVLERQS
//
