ID K0IEW9_NITGG Unreviewed; 285 AA.
AC K0IEW9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=Transcription initiation factor IIB {ECO:0000256|ARBA:ARBA00013932};
GN Name=tfb5 {ECO:0000313|EMBL:AFU58315.1};
GN OrderedLocusNames=Ngar_c13780 {ECO:0000313|EMBL:AFU58315.1};
OS Nitrososphaera gargensis (strain Ga9.2).
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
OC Nitrososphaeraceae; Nitrososphaera.
OX NCBI_TaxID=1237085 {ECO:0000313|EMBL:AFU58315.1, ECO:0000313|Proteomes:UP000008037};
RN [1] {ECO:0000313|EMBL:AFU58315.1, ECO:0000313|Proteomes:UP000008037}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ga9.2 {ECO:0000313|Proteomes:UP000008037};
RX PubMed=23057602; DOI=10.1111/j.1462-2920.2012.02893.x;
RA Spang A., Poehlein A., Offre P., Zumbragel S., Haider S., Rychlik N.,
RA Nowka B., Schmeisser C., Lebedeva E.V., Rattei T., Bohm C., Schmid M.,
RA Galushko A., Hatzenpichler R., Weinmaier T., Daniel R., Schleper C.,
RA Spieck E., Streit W., Wagner M.;
RT "The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis:
RT insights into metabolic versatility and environmental adaptations.";
RL Environ. Microbiol. 14:3122-45(2012).
CC -!- SIMILARITY: Belongs to the TFIIB family.
CC {ECO:0000256|ARBA:ARBA00010857}.
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DR EMBL; CP002408; AFU58315.1; -; Genomic_DNA.
DR AlphaFoldDB; K0IEW9; -.
DR STRING; 1237085.Ngar_c13780; -.
DR KEGG; nga:Ngar_c13780; -.
DR PATRIC; fig|1237085.11.peg.1339; -.
DR HOGENOM; CLU_043736_0_1_2; -.
DR InParanoid; K0IEW9; -.
DR Proteomes; UP000008037; Chromosome.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd20550; CYCLIN_TFIIB_archaea_like_rpt2; 1.
DR Gene3D; 1.10.472.170; -; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 1.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR023486; TFIIB_CS.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618:SF13; TRANSCRIPTION INITIATION FACTOR IIB; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS00782; TFIIB; 2.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:AFU58315.1};
KW Protein biosynthesis {ECO:0000313|EMBL:AFU58315.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008037};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 106..187
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT DOMAIN 200..281
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
SQ SEQUENCE 285 AA; 31322 MW; 9F6A6AC375AB4050 CRC64;
MVTDNSSGEM FCGNCGFVVS ERIEELGPEW RAFSKEEHED RSRAGIPTSL AMHDMGLATI
IGPVDKDASG KPLSASMKST IERLRTWDSR SQVHEPVDRN FRQAFSELDR LKDKLAVGDA
VIEKAAYVYR KALEKGLVRG RSISALVAAA LYAACRDTET PRTLKDIANA SNIKKKDVAR
CYRLLIRELD LKMPVVDPVK CVARIASKAG LSEKTKRKAL EILKKAEEGK ISAGKDPMGL
AAAALYVACV MNGENKTQKD VAEAAGVTEV TIRNRYKGLK THLRL
//
