ID K0NH64_DESTT Unreviewed; 922 AA.
AC K0NH64;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=type I site-specific deoxyribonuclease {ECO:0000256|ARBA:ARBA00012654};
DE EC=3.1.21.3 {ECO:0000256|ARBA:ARBA00012654};
GN OrderedLocusNames=TOL2_C01770 {ECO:0000313|EMBL:CCK78347.1};
OS Desulfobacula toluolica (strain DSM 7467 / Tol2).
OC Bacteria; Thermodesulfobacteriota; Desulfobacteria; Desulfobacterales;
OC Desulfobacteraceae; Desulfobacula.
OX NCBI_TaxID=651182 {ECO:0000313|EMBL:CCK78347.1, ECO:0000313|Proteomes:UP000007347};
RN [1] {ECO:0000313|EMBL:CCK78347.1, ECO:0000313|Proteomes:UP000007347}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 7467 / Tol2 {ECO:0000313|Proteomes:UP000007347};
RX PubMed=23088741; DOI=10.1111/j.1462-2920.2012.02885.x;
RA Wohlbrand L., Jacob J.H., Kube M., Mussmann M., Jarling R., Beck A.,
RA Amann R., Wilkes H., Reinhardt R., Rabus R.;
RT "Complete genome, catabolic sub-proteomes and key-metabolites of
RT Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading,
RT sulfate-reducing bacterium.";
RL Environ. Microbiol. 15:1334-55(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of DNA to give random double-stranded
CC fragments with terminal 5'-phosphates, ATP is simultaneously
CC hydrolyzed.; EC=3.1.21.3; Evidence={ECO:0000256|ARBA:ARBA00000851};
CC -!- SIMILARITY: Belongs to the HsdR family.
CC {ECO:0000256|ARBA:ARBA00008598}.
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DR EMBL; FO203503; CCK78347.1; -; Genomic_DNA.
DR AlphaFoldDB; K0NH64; -.
DR STRING; 651182.TOL2_C01770; -.
DR REBASE; 53430; DtoTol2ORF1790P.
DR KEGG; dto:TOL2_C01770; -.
DR PATRIC; fig|651182.5.peg.221; -.
DR HOGENOM; CLU_009326_0_0_7; -.
DR Proteomes; UP000007347; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR CDD; cd18032; DEXHc_RE_I_III_res; 1.
DR CDD; cd18799; SF2_C_EcoAI-like; 1.
DR Gene3D; 3.90.1570.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR013670; EcoEI_R_C_dom.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR007409; Restrct_endonuc_type1_HsdR_N.
DR PANTHER; PTHR47396:SF1; ATP-DEPENDENT HELICASE IRC3-RELATED; 1.
DR PANTHER; PTHR47396; TYPE I RESTRICTION ENZYME ECOKI R PROTEIN; 1.
DR Pfam; PF08463; EcoEI_R_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF04313; HSDR_N; 1.
DR Pfam; PF04851; ResIII; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759, ECO:0000313|EMBL:CCK78347.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007347};
KW Restriction system {ECO:0000256|ARBA:ARBA00022747}.
FT DOMAIN 162..318
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 922 AA; 105929 MW; 58E301808B5B974B CRC64;
MIDRELAQSG WNVNDPTQVI EEFDILTSAP DGVAESVSNY GNHQFSDYVL LGKNGKPLAV
VEAKSTSKDA AIGREQAKQY CYNIQIQIGG KLPFCFYTNG HEIFFWDLEN YPPRRVMGFP
TREDLERFQY IRHNKKPLTH EFINKDIAGR DYQIRAIRSV LEAIEAKKRD FLLVMATGTG
KTRTCIAVAD VLMRTSHVER VLFLVDRIAL REQALSAFKE HLPNEPRWPN VGEKLIAGDR
RIYVSTYPTM LNILRENDRK LSPHFFDLIV VDESHRSIYN TFGEILDYFK TMTLGLTATP
TDIIDHNTFK LFHCEDGLPT FAYTFEEAVN NVPPYLCSFQ VMKIQTRFQM EGISKRTISL
EDQKRLILEG KEIEEINFEG TQLEKQVVNK GTNILIVKEF MDECIKDHNG VLPGKTIFFC
SSKAHARRIE TIFDQLYPQY KGELAKVLVS DDPRVYGKGG LLDQFTNNDM PRIAISVDML
DTGIDIRELV NLVFTKPVYS YTKFWQMIGR GTRLLEPKKI KPWCTQKDVF LIIDCWDNFE
YFKLNPKGKE LTPQVPLPVK LVGLRIDKIE TALTKNKPDI VLREAGKLKE QIRLLPQTSV
VIKEAAALLS DVGKASFWDT LTHEKLHWLR IHIKPLFKTF SDADFKAMRF ERDLLEYTLA
VLNEETIKAE TLKTGIVEQI SELPLSVPFV KLEESLIRSA QGNHYWRSIS DHDLDSLCDK
LGPLMKFCEQ EDPGANQVHL NLADKLHNKE MVEFGPQHEA VSISRYRDMV EALIMELTSS
HPILQKLQNG KDVTAQEAQA LAEQLHSEHP HITERLLRQV YKNKKARFIQ FIRHILGLEV
LKSFPESVSE AFEQFIQQHT TLSSRQLAFL NLLKEVVIER EAIEKKDLIH APFTVIHPQG
IRGVFSPAEI KEILSLTQRL VA
//