ID K0S6J9_THAOC Unreviewed; 1352 AA.
AC K0S6J9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719};
GN ORFNames=THAOC_18688 {ECO:0000313|EMBL:EJK60895.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK60895.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK60895.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK60895.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR005719}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC4 subfamily.
CC {ECO:0000256|ARBA:ARBA00006005}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK60895.1}.
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DR EMBL; AGNL01020600; EJK60895.1; -; Genomic_DNA.
DR EnsemblProtists; EJK60895; EJK60895; THAOC_18688.
DR eggNOG; KOG0996; Eukaryota.
DR OMA; CPALDNM; -.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0051276; P:chromosome organization; IEA:InterPro.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR18937:SF172; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|PIRNR:PIRNR005719};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841}.
FT DOMAIN 608..722
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT REGION 1..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 745..769
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 933..955
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1043..1099
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1134..1167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 266..300
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 340..367
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 403..567
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 773..828
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 939..955
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1047..1062
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1076..1090
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1352 AA; 151187 MW; E41A425777CD1297 CRC64;
MTEMEDKNNS NTTEGPPIAM GAMEDDANDA LDGGVVEMQE GGADRGLGAP PGVEMPTAVA
ADEGRPPARL MITKMELTNF KSYAGTKTIG PFHKCFSSVV GPNGSGKSNV IDAMLFVFGK
RAKKLRLNKV SELIHSSDAY KDSPLQYAKV SVYFHEIVDT GEGDDDYDVV EGSEIVISRL
ARRDNTSQYQ LGNRNATFKK VAEFLGSKGI DLDNNRFLIL QGEVEMISMM PPKGKTENDE
GLLEYLEDII GSNSYVEPAN LAAEKVEQLT EVRQEKLNRV KAAEKEKDGL AGAKAEAEAL
VSKDREIRRK RNVLFQIHGM HARREGEEAS EQRGLLSEKL DAERLRLSEA DERVAEIENG
MSDQKKEYDR VYAELTETKE SYTAYERQDI QMKENIKFEK GNIKKLEGKV TAEQSKMEDA
QTALDEAEES IPTLEKRIEK CTETKADEDS KLAAIFEETK EITEQLRVEL EEKTQELAPL
LAERSVYQNS LDTAQMEVKL LVDTATRASE QLVRAEEELA SIDSAQLGKR KELKELESQL
GKDKARVKEA EVEIKEMTEK ETRLAKKSTD LLTQLEVSRA SMQSTTGRSR VTNAILKAAK
KNGELANCGV MGRLGDLATI DEKYDVAVST ACGMLDHIVV QTTAGTQKCL EFLRKHNLGR
ASFVPLDKMK KGAHDRQVST PEGAPRLFDL INPGHISITP ALFLAVGNTL VAPDLETATR
WAYEFGKRWR VVTVDGKLIE TSGTMSGGGK SVQKGKMKLS NGKKGTKTVN PMVETSEEDC
KKLESEARAA QDKLKACRVR RRDLADEIRS LNKEIKTLSV KLPKLQMEIE GFDTTRQELT
KQLPALRQQS TLSDADLSKK AQLLDKVDEC KSEMAECVKV TKELEETVAK LQKSIINAGG
SKLKNQQKAC DKAKKALNDS NKELNSAKST IANSKKTMKK AGRQRETAES ELEKSRESLE
RMQEEQKELQ GGAQEVKDAY EQVKEEEAIK RKELEGSAQQ KLKCVEVELS AKIEALEKTI
KDSERKSNHW RKEAGQLRKI ERQEEIDYDF SDDEDEDDDD DAKVTTEKGT ANSDAEDDAM
DEDNGEDYKG QEDGDENKKA DVRSEVKLFI IAAKASGCVP RAVLHRIDQG RHFHPREGER
FDSQERQHGV SDLDQITSER NEARKEHEDL RRLRLEKFMD GFSQITLKLK EMYQMITLGG
DAELELVDSL DPFSEGIVFS VRPPKKSWKN IANLSGGEKT LSSLALVFAL HHYKPTPLYV
MDEIDAALDF KNVSIVAHYI KERTKNAQFI IISLRNNMFE LADRLVGIYK TNNCTKSVTI
NPRTFTKGGM FQDQGAIRGP LKARTNTEQE TA
//
