ID K0S800_THAOC Unreviewed; 467 AA.
AC K0S800;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Anaphase-promoting complex subunit 4 WD40 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=THAOC_18513 {ECO:0000313|EMBL:EJK61054.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK61054.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK61054.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK61054.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK61054.1}.
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DR EMBL; AGNL01020453; EJK61054.1; -; Genomic_DNA.
DR AlphaFoldDB; K0S800; -.
DR EnsemblProtists; EJK61054; EJK61054; THAOC_18513.
DR eggNOG; KOG0275; Eukaryota.
DR OMA; MMKQQEP; -.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045184; SMU1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22848; WD40 REPEAT PROTEIN; 1.
DR PANTHER; PTHR22848:SF0; WD40 REPEAT-CONTAINING PROTEIN SMU1; 1.
DR Pfam; PF00400; WD40; 4.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT REPEAT 68..99
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 148..189
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 101..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..29
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 467 AA; 50143 MW; B41C9DC5FDDB6CA4 CRC64;
MLHDDGEDDE ALDPEEDGAK RSKRRKKHAD MRFDLLLGNV VVDKKKSRRG SSETAAERIP
GKACQTIKLG KKTFVESACF HPDGMGLVTG SSDGFIEVWG EPKKRNKSSE GGNDDDGQSP
SSAPPKPHEV NFEKLRTSDL PYQKNDELMS HDAAVLALAV SRDGTMLASA CAHGTISVWR
LETGRLLRRI ERAHGGSSAK DGAAVTCLEF SPDSSRVLSG GHDATVREHG LLSSRMMKQF
VGHASYVNCA SYVALPDFLS NDDEADAVDD PLSKDRARFL AVVSASADGT VRIYHGRTAE
AIRSINPPVA GLSSAGLVRE SNSVVRSTSV HTVLHLHAPP QTMVVVPRAS RAFLMSYTGS
ILRVYARDDV QGANYLAGGV SRSNRYLFLA CDDGKCAVFD VMSGSVERIV NSFGKECTTS
AAGGGESDSA TTRRAEISGV VVHPHCGYLG GYSNDRGQKR GVLTLFK
//
