ID K0SKS7_THAOC Unreviewed; 1194 AA.
AC K0SKS7;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 13-SEP-2023, entry version 34.
DE RecName: Full=PAS domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=THAOC_13165 {ECO:0000313|EMBL:EJK65935.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK65935.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK65935.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK65935.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK65935.1}.
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DR EMBL; AGNL01015366; EJK65935.1; -; Genomic_DNA.
DR AlphaFoldDB; K0SKS7; -.
DR EnsemblProtists; EJK65935; EJK65935; THAOC_13165.
DR eggNOG; ENOG502QZ44; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR31600; TINY MACROCYSTS PROTEIN B-RELATED; 1.
DR PANTHER; PTHR31600:SF2; TINY MACROCYSTS PROTEIN B-RELATED; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 709..731
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 751..770
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 791..812
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 948..972
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1020..1043
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1063..1084
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 268..338
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 345..396
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..236
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1149..1179
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 13..29
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1194
FT /evidence="ECO:0000313|EMBL:EJK65935.1"
SQ SEQUENCE 1194 AA; 134251 MW; EC1E92CFF37D23AD CRC64;
MPSTTGGRAD AEDDSSSASE KRGQRRGFSR RDSLPSATKF SKAVRRHSLL LSSINRGSFT
SRRTLPEEGV DLHSFFRSAT SLTRMREELK SAQDGDAENN SSTGVCARTE KSGGGRLLLH
CIGLNSELIS SGKSSAATLS RVNEFVMSEL LPAHQSAIIH EDDEGRIPFT EAISSWISSR
RAIRKWKLET DKTKQRVSVL AAKLKRRMAV AAMKRKQNLE EGDDSDSESL SAESASVTSS
VNSDNVYSFR REQTFTSFLF GNNDEREARR ELKMIVESAD DAVFCIDEKG LILMTNKAAT
KQFGWDKNAL IGSNIARICN RNDAPNHTMY LERYLRTGVK RVMGNKRELL ARRKDGSVFW
IELGLTEVSI GLGKFLFIGV VKDLTELKKH RRSLDYSKSS DLLDNAADEA HRMNQKTRGI
PLLVEWCLST LSDFVDHNGF NKNTEGDLDD EDDESVDLMS SVANLKYSFT SFTDNKETQM
NPTLLHELVV EKVAAIPHLL EELLLIEDPE ARRRVFDMSI VHKVLFSRES LGDGAWLMQM
LDKSIRVQKS TIKETDLSGD LDTDEGRAYQ LQMKIAADEC RALAEAVVFY LEQVSSLSVQ
DDLHVFNNLQ LYETISKSRR NLGRHVSGAD FLSTGDVSHF QEHRDKLFNT VGSLNGLVRR
LGVLDDDLGR CGMADFHHPA QDSNAHIFIK VKRAAATLVI RKLLDRVMFS PYACISALFD
GINHLLLLVA FRLGPAPAMF HLANNDKMFN HQHYLLANIV LMTCVVFFGT KAIHAGLAKW
AISTNLFWQD AFSFWSMLET VPLVAVVISS LSVDMVLHHR AARTDNDADV PFALRTLVAG
TTPFLWLRIL AYIKIRNKQL ATFILCSVEI MKVGELTLSS YEFCGLNKVQ SCRTSSGFCL
CSFAQMWLTL TMDTSQANTG GYYLNGYLKA YTMMLGDLEI DSLKTHPLIA ILFVVYTFGV
TIVLLNILIA IVSDSYANSF VSSKMMLGKA RVMFVSELLS IKTFHQMWME GKTGNTRRNI
NYFFFGIAAF HCFIVTGTVV QKIEYGTYCE TMASPRSIKL EATFTFTFML FFLFAMKSTV
AYVLNTFNDK GGLINPTDSD DTAWFKSTMN WFVKRTFSSF SASFDSLFDR DDKILLEGYG
DEFGDSQEHR AEEKLQRSLE KTKKQLKNEL KSLSSALNQG LIDMESQNRN ELLK
//
