ID K0SU95_THAOC Unreviewed; 1375 AA.
AC K0SU95;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
DE Flags: Fragment;
GN ORFNames=THAOC_10280 {ECO:0000313|EMBL:EJK68529.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK68529.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK68529.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK68529.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK68529.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGNL01011212; EJK68529.1; -; Genomic_DNA.
DR EnsemblProtists; EJK68529; EJK68529; THAOC_10280.
DR eggNOG; ENOG502RZ2E; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd11709; SPRY; 1.
DR Gene3D; 2.60.120.920; -; 1.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR043136; B30.2/SPRY_sf.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102:SF147; FIBRONECTIN TYPE-II DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF08238; Sel1; 2.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 1088..1129
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 50..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 90..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 169..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 763..790
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 809..854
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 889..960
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 998..1020
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 378..407
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 51..74
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 185..266
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 772..790
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 896..910
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 917..934
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1003..1017
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EJK68529.1"
SQ SEQUENCE 1375 AA; 149845 MW; 19BADBD7C7EF6389 CRC64;
RAVLRRSNGY STHLPTGGTY RGAQFDGKRD DALRSYIRIL IGISARPEVL DRTSPQPTST
ATAFAATRRS SDRRASANVV LPRSAEVRKF TPLSGGRRGI VRRSPGGAPV PGNEREAGSP
ADRAAPRPRS LRLPTPCSEV KILKMDGDGA PSQPLSDCDE GDTSAMFAVR TASRRPRGGP
PRRDSQNSRR NATSSAGARR SIRSRTQSAD SSTSLSTVGC SGGSGSIGGS GEGAQRSSSR
RRASARPGNI SNDGDQGPFP SQRSRLTDRT SMDEDIEINQ LLWHVTQGGS QTPRATQDGS
QTHHAGDEAQ LWELSMAFEF APSRGYIHFH SFAYRMPSAP LAQPHLFYLD GSYIEPPSTS
RMADDGRVKR LKTSEDGAAN AELQRRNAEL HSENEELRRE NAQFRARLEG EHTVLPVARV
VTITTTVDLS RVDTSIVTQI SSFLGASLEL FNLALTCKSF GWRQPTSTQN WSLVEEVSRQ
LVCSRATDDE MGCLPRYVGG TRTWLSILNR FEHLLLFDVL LGGHIEHRNG DKATVHSTHS
WVCTAVSSGS VMRTGTHYAE FQITGGPSIG IVRPMPSLET GAFGNYCFFI GLPRSGITEF
YPTFLAQRSD DWGDGSIHAC EYLSGDGTMK WTNWGSTTVE GKLWEGMKFS LSGDTVGMLL
NLDNGTLTVY KNNRRLGVLK DGLSGPYCWY ATLYTRDAVD IDGEVEEQRP RLSNPTFGEK
TLLPCFARSL ITTTPDSLQA PTTSAPVIEV IDPLTSSLAS RPGRYHLSRL DPSSASAGTS
PSLVAARTES DSSASRHFSV SIFSIPRGPA LSGAARRSPD RAIPASTGGP AGRARTALVD
TPGGPTANSS RAFPIFSQTR QQGVHVVRRA DPQRPPLFHT FFEGAPWGCV SSPETASPSP
PGPPPATLPN WGHRHRPSTT GRGDATRDRQ SLSARHPDGT PSRLPPRGRH GARRQGRRGV
GVMSLVGVGL SRGSASWARA KRSLRSVSTQ IHIGFAEDGH TATSVRPDQK PEGDAQRTTH
GHPVISQGYA EMLFVETSQL EPLSNNLVAP ALSFLARLTP IFARQLENHR NPQSTMSCVP
VADDGDTCAN CGKQGSDTVK LKNCTACRLV KYCGVDCQRA HRKQHKKTCK QRAAELQDEQ
VYSQGHKRPE GEFCPLCTLP IPLPVNENSL FEVCCMKRIC LGCDLAAQKR GMFDCAFCRT
PCPDSDDGKL KMIQARVRKK DPQAIDMLGK KYFFGSLGSQ KDVRRAVELF TEAAELGSIE
ALFDLGNAYF HGEGVQQDKG KANEFYKEGA MQGHVECRYN LGQAEIRKGD LDRAVRHWVI
SAKMGHENSV ENIKKLFTAG VGTKDQYMKA LQGYQNAVEE VKSHDRDEVK RLGST
//
