ID K0T2H0_THAOC Unreviewed; 550 AA.
AC K0T2H0;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
GN ORFNames=THAOC_07209 {ECO:0000313|EMBL:EJK71364.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK71364.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK71364.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK71364.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK71364.1}.
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DR EMBL; AGNL01007331; EJK71364.1; -; Genomic_DNA.
DR AlphaFoldDB; K0T2H0; -.
DR EnsemblProtists; EJK71364; EJK71364; THAOC_07209.
DR eggNOG; ENOG502RZ2E; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102:SF147; FIBRONECTIN TYPE-II DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF08238; Sel1; 3.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 258..299
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 34..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 129..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 530..550
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 129..181
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..234
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 550 AA; 60313 MW; B71E2C9DE5F134E7 CRC64;
MTTSSPSFLA AFFFFAAAGF FSLPSVVARW SPSSSSARLN PSANAPPLTP REDFRPPGAR
SSAAAPPAAA ALASFSRHSL SRRTRIFLAA LRSARRPSRR PLVLLAAAPQ PLPAAAPPRE
LQPLGLRHRP VEHHHGPDAV VQQPHEPEEE DTHVRPVRER PARLRVAARL GDLREPDRGV
DRQGLPGQGL DGQPVARGKE QAPQVLDTHG PTVYRGPLAD DQKHGSRSPP IRDAPERADI
LNLTMSCVPV LNDGDELCAN CGKQGSDTIK LKSCTACRLV KYCGVDCQRA DRKQHKKACK
QRAAERKDEQ LYSQGHERPE GDFCPICTLP IPLPMDKHSG FNACCMKRIC HGCTVAAQKR
GLLDCAFCRT AILDNNADNL AMIQARVAKK DPEAINFLGE KFVSGQFGLH KDMQRAVKLL
TEAAGLGSIK ALFNLSVAYD HGEGVQQDKV KAVEFYKKAA MQGSVEARHN LGCIETRKGN
HDRAVRHFLI SAKMGSKDSL EAIKKMFMAG LATNEQYVKA LKGHQEALEE MKSHDRDEAQ
RLRDEWGLNL
//
