ID K0Z5B0_9CORY Unreviewed; 954 AA.
AC K0Z5B0;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Rne/Rng family ribonuclease {ECO:0000313|EMBL:EJZ82565.1};
DE Flags: Fragment;
GN ORFNames=HMPREF9719_00496 {ECO:0000313|EMBL:EJZ82565.1};
OS Corynebacterium otitidis ATCC 51513.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC Corynebacteriaceae; Corynebacterium.
OX NCBI_TaxID=883169 {ECO:0000313|EMBL:EJZ82565.1, ECO:0000313|Proteomes:UP000006078};
RN [1] {ECO:0000313|EMBL:EJZ82565.1, ECO:0000313|Proteomes:UP000006078}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51513 {ECO:0000313|EMBL:EJZ82565.1,
RC ECO:0000313|Proteomes:UP000006078};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Huys G., Walker B., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S.,
RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A.,
RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Turicella otitidis ATCC 51513.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJZ82565.1}.
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DR EMBL; AHAE01000029; EJZ82565.1; -; Genomic_DNA.
DR RefSeq; WP_004600386.1; NZ_JH815192.1.
DR AlphaFoldDB; K0Z5B0; -.
DR eggNOG; COG1530; Bacteria.
DR HOGENOM; CLU_003468_2_1_11; -.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000006078; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 1.10.10.2480; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF04760; IF2_N; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006078};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 517..600
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 278..470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 911..954
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..114
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..194
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..234
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..321
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 322..338
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..435
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 933..954
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 954
FT /evidence="ECO:0000313|EMBL:EJZ82565.1"
SQ SEQUENCE 954 AA; 103992 MW; E6A4ADC77E313726 CRC64;
MANSENDTRD EKKKATGARR RRRASASGGP TDKKVKDAQA TTANAEADTT SSTEGENESA
KKKPARAKKS AGKAKSSGAK KDQGAKKDAD AKKDQGDKQS ESPKKGEEAK GKPTRRRTHS
AKPKAAGAQP DAKGNKGDEP EETQPKRESK RGARRAKKDE KPAASDAKKA DKAEESAASR
KGDDGKADKK KQGKPARGGS RRRRGATSEG AVSEETRRAA REFDAASLKP KQRVHELAKR
LGATSRELIV ALNGLGITKV AQSTLVEEDA RRLLEALAEP RDAAEAKEAD EKLRERVEKN
VANEINQIEQ KVDRDLAAER DDEAEAGDEA EEPAETEVGE PAGDAAGEAA EPAPKPAGSS
NRRRAPLFKA PEETADDEDS DDAEEEATGG RGRRERRRKD KAKGGKDAKD SKDSKDSKDK
SEKKEPERRD EPVALRGSTR LAAKRRRRQE RSRNGQPAFT EADEAAAHAK HRDVERTIVV
RDKERDGEGT LTQVGILEDG RLVEHVVTSE GQASLIGNVY LGRVQNVLRS MEAAFIDIGK
GRNGVLYASD VDWKAAGLDG RSRRIEQVFK NGDQALVQVT KNPSGHKGAR LTGHVSLAGR
FLVYTPGGST AGVSHKLPAG ERNRLKKVVK GLVPEGDGAI VRTAAEGVDE QEIGADIQRI
TRLWDDIERR AKKERSSKGA KPVALYEEPD LLVKVVRDLF NESVDRLVVD GRRSWNTVNA
YVQSVAGSLS DRLERYDRGA HGGRDAFEEL NIDEQIEEAL QRVVYLPSGG SLVIDRTEAM
TVIDVNTGRF TGSGGNLEET VTRNNLEAAE EIVRQLRLRD VGGMVVIDFI DMVLEENQDL
VLRRLNEELE LDRTRHQVSE VTSLGLVQLT RKKISTGLLE TFSKPCEACE GRGLVLFDEP
VDSEQTEAYL EAERRRRGDE DDVVDAADEA ADAREDVDAG APDRDAEEAT GGRA
//
