ID K1PRA9_CRAGI Unreviewed; 728 AA.
AC K1PRA9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Collagen alpha-4(VI) chain {ECO:0000313|EMBL:EKC24148.1};
GN ORFNames=CGI_10018479 {ECO:0000313|EMBL:EKC24148.1};
OS Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea.
OX NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC24148.1};
RN [1] {ECO:0000313|EMBL:EKC24148.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC24148.1};
RX PubMed=22992520; DOI=10.1038/nature11413;
RA Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W., Paps J., Zhu Y.,
RA Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., Wen B.,
RA Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., Xu Z., Liu Y.,
RA Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., Cheng P., Jiang X.,
RA Li J., Fan D., Wang W., Fu W., Wang T., Wang B., Zhang J., Peng Z., Li Y.,
RA Li N., Wang J., Chen M., He Y., Tan F., Song X., Zheng Q., Huang R.,
RA Yang H., Du X., Chen L., Yang M., Gaffney P.M., Wang S., Luo L., She Z.,
RA Ming Y., Huang W., Zhang S., Huang B., Zhang Y., Qu T., Ni P., Miao G.,
RA Wang J., Wang Q., Steinberg C.E., Wang H., Li N., Qian L., Zhang G., Li Y.,
RA Yang H., Liu X., Wang J., Yin Y., Wang J.;
RT "The oyster genome reveals stress adaptation and complexity of shell
RT formation.";
RL Nature 490:49-54(2012).
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DR EMBL; JH816675; EKC24148.1; -; Genomic_DNA.
DR AlphaFoldDB; K1PRA9; -.
DR HOGENOM; CLU_434307_0_0_1; -.
DR InParanoid; K1PRA9; -.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0008061; F:chitin binding; IEA:InterPro.
DR CDD; cd01450; vWFA_subfamily_ECM; 1.
DR Gene3D; 2.170.140.10; Chitin binding domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR002557; Chitin-bd_dom.
DR InterPro; IPR036508; Chitin-bd_dom_sf.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR24020; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24020:SF70; PH DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01607; CBM_14; 2.
DR Pfam; PF00092; VWA; 1.
DR PRINTS; PR00453; VWFADOMAIN.
DR SMART; SM00494; ChtBD2; 3.
DR SMART; SM00327; VWA; 1.
DR SUPFAM; SSF57625; Invertebrate chitin-binding proteins; 3.
DR SUPFAM; SSF53300; vWA-like; 1.
DR PROSITE; PS50940; CHIT_BIND_II; 1.
DR PROSITE; PS50234; VWFA; 1.
PE 4: Predicted;
KW Collagen {ECO:0000313|EMBL:EKC24148.1}.
SQ SEQUENCE 728 AA; 81517 MW; A2291AB83A4E884D CRC64;
MDAQQKQRVV ALLLCVLCWG LVLSAVDRTR EDRAVGADIV QAVVDIIREN CIYPNDRVFL
RRLAYVQSKD GKNTNTFRQN YYGGIWQVEK SEFESTKQCY GIEDMCQVIQ DKLNIDWRAV
AWTDLTKPLY SGLAASLRLQ QIAGNNTPGV IERQADFWVD NYHKGQSPHY FISEVNQIDE
NKNCEIDLAF ILDGSGSITF LNFLRILDFV KNVTKQFEIG PDAVQVAAIS FSDYARVEFG
FGDFSSHAAL EIAIDSIQYD AGGTNTAHGI RTARRGVFQH NTRPNSVKVG IVITDGYSNY
YPSTVLEASY AKDAGIVLFA IGIGDVNEME LNEVASNPNC THVFFLTQFS EIDSLVYEIK
KAACRAPITL VNPTTGPTSS TPVNNTITEI VEVINKTVDV FIPPSTDNTD TKMNVSVNCG
IVHIYMSYDN PHPSPVLYSD KVTATDGHPA ILYFNQTVGG RPLYLSFVGT QLPLEAAGLR
NCSDAKYVIG IAKENKTDVE IVCRQNKVER ECTKTDFELS EKYKQYLCRT NGDLNTLIVT
NPCTATAIQN NEMYHPFPYD DTKFIKCDYQ QKMYITQCPN GERYHQGSHS CGSTTITITN
DKTPLDPNLS NPCTAHALMN NIFFFTYTKD KTKFIHCDVW GHAWILNCPS NLVWSQQTQT
CIEDTHSSSN PCTQDKLDQG ITMFPLQDPH KYIHCDNGLN PWVQSCVAGT VFDYASQNCV
WQSNSILG
//
