ID K1QB14_CRAGI Unreviewed; 1088 AA.
AC K1QB14;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Tripartite motif-containing protein 56 {ECO:0000313|EMBL:EKC31068.1};
GN ORFNames=CGI_10020267 {ECO:0000313|EMBL:EKC31068.1};
OS Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea.
OX NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC31068.1};
RN [1] {ECO:0000313|EMBL:EKC31068.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC31068.1};
RX PubMed=22992520; DOI=10.1038/nature11413;
RA Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W., Paps J., Zhu Y.,
RA Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., Wen B.,
RA Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., Xu Z., Liu Y.,
RA Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., Cheng P., Jiang X.,
RA Li J., Fan D., Wang W., Fu W., Wang T., Wang B., Zhang J., Peng Z., Li Y.,
RA Li N., Wang J., Chen M., He Y., Tan F., Song X., Zheng Q., Huang R.,
RA Yang H., Du X., Chen L., Yang M., Gaffney P.M., Wang S., Luo L., She Z.,
RA Ming Y., Huang W., Zhang S., Huang B., Zhang Y., Qu T., Ni P., Miao G.,
RA Wang J., Wang Q., Steinberg C.E., Wang H., Li N., Qian L., Zhang G., Li Y.,
RA Yang H., Liu X., Wang J., Yin Y., Wang J.;
RT "The oyster genome reveals stress adaptation and complexity of shell
RT formation.";
RL Nature 490:49-54(2012).
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the TRIM/RBCC family.
CC {ECO:0000256|ARBA:ARBA00008518}.
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DR EMBL; JH817637; EKC31068.1; -; Genomic_DNA.
DR AlphaFoldDB; K1QB14; -.
DR HOGENOM; CLU_285013_0_0_1; -.
DR InParanoid; K1QB14; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd19757; Bbox1; 1.
DR CDD; cd19776; Bbox2_TRIM25_C-IV; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR047153; TRIM45/56/19.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR000315; Znf_B-box.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR25462; BONUS, ISOFORM C-RELATED; 1.
DR PANTHER; PTHR25462:SF296; PROTEIN PML; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF63825; YWTD domain; 1.
DR PROSITE; PS50119; ZF_BBOX; 2.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
SQ SEQUENCE 1088 AA; 123016 MW; 6A23C9D5367A522B CRC64;
MATCEALIDA VDLTLCSICL EKFKFPRLLP CSHSFCQHCL CAYIVSTCEE KDVPLGFPCP
VCREFIPSPG NPEETIKWAE KFPINDVLVL LMNESRDIKL CWPCKRGNEE EEAIEFCLTC
KEPLCKMCSK CHRKSLISMN HKMCLLSEIG SCSFDFGHTR NTVSCEKHNG KQIELYCYNH
KTPCCTLCFT EDHKSCLNIL AVEKVVKNMQ RLGQMKSLEK EIEKMKVDLE IAKQSQKDNL
EALEDDSDMF TKEAEELHQK VLSHVNKLFD EHFTEIAKNT KEAKRKLEKN TIAISDRLDF
LQYLLRLLKS ANGTSDSEET RLNYISTLHK VKENLEKLSE YPLSEFKVNL KSDIHNSFKK
TLEFTRIANI SVTENSAILP TKVDIIKAEF SHLQKYQNVM ARLRGCTVLP SGNLLCVDNI
SSNCMLFTVE NQVIGQPTSA FEVDPNPWDI LLDDGILYIS HDNKDTFRIL RFSADNFKAL
DPLPMDTGKS CTGLAIIGDV LFVVSDDRFI LKMNKNGRGS SEMIYETETR DLRFLTSVAD
GMLLCSNFTD HSVIALDDLG DEIWTYKHNE LKGSYGLDKD PQNYIYVAGM KSNNIHILSV
EGEMTVLDDH AECYRHRVCN EAFPCEVCSK WSEEKRTLIR KMIERKKSEA GRKSATLPNP
EVPSVGNSGN RSDSQVSSAG NVAASENLSP TETSQNGGDL TQGSVPPQVG NFPPFVLGNF
EAQWQQYQEN CMKRLIDARI KELVQDSNKQ PTIAITSDVR SDRACNRFDR FRPSDDQRSR
ESDDDDLVSH RGETDQVLSN SLDDVIDVHE DNRSEFGNSV LGSVHTHDTD SNGSCMVDWK
NFVKKVSTEL NINSVDASET QSRDFKSYMS NRLIGTKSST PQQSLPMDGY ILNTLTDVDE
EFQRKGAIRT YKASDDEKYR VASSDFDKYC TTPRLDDNIE DSSFTTGRKG NKNSYRFRNP
MLHSRNNELW KIDQGSRLLL RELTYASLIT SYVDNVVSDE DKTEALQALM QVFKSMADVT
SRMSGLVSVA TFLADDECCF AFVAAFPSLY KIKGSGLTSG LVDSARVLTF DITGDCTHSR
HHKTHHQK
//