GenomeNet

Database: UniProt
Entry: K1QLL9_CRAGI
LinkDB: K1QLL9_CRAGI
Original site: K1QLL9_CRAGI 
ID   K1QLL9_CRAGI            Unreviewed;       788 AA.
AC   K1QLL9;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   25-OCT-2017, entry version 25.
DE   SubName: Full=Short transient receptor potential channel 3 {ECO:0000313|EMBL:EKC22536.1};
GN   ORFNames=CGI_10002103 {ECO:0000313|EMBL:EKC22536.1};
OS   Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC   Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia;
OC   Ostreoida; Ostreoidea; Ostreidae; Crassostrea.
OX   NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC22536.1, ECO:0000313|Proteomes:UP000005408};
RN   [1] {ECO:0000313|EMBL:EKC22536.1, ECO:0000313|Proteomes:UP000005408}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC22536.1};
RX   PubMed=22992520; DOI=10.1038/nature11413;
RA   Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA   Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W.H., Paps J.,
RA   Zhu Y., Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J.,
RA   Wen B., Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D.,
RA   Xu Z., Liu Y., Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B.,
RA   Cheng P., Jiang X., Li J., Fan D., Wang W., Fu W., Wang T., Wang B.,
RA   Zhang J., Peng Z., Li Y., Li N., Wang J., Chen M., He Y., Tan F.,
RA   Song X., Zheng Q., Huang R., Yang H., Du X., Chen L., Yang M.,
RA   Gaffney P.M., Wang S., Luo L., She Z., Ming Y., Huang W., Zhang S.,
RA   Huang B., Zhang Y., Qu T., Ni P., Miao G., Wang J., Wang Q.,
RA   Steinberg C.E.W., Wang H., Li N., Qian L., Zhang G., Li Y., Yang H.,
RA   Liu X., Wang J., Yin Y., Wang J.;
RT   "The oyster genome reveals stress adaptation and complexity of shell
RT   formation.";
RL   Nature 490:49-54(2012).
CC   -!- SIMILARITY: Belongs to the transient receptor (TC 1.A.4) family.
CC       {ECO:0000256|SAAS:SAAS00933551}.
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DR   EMBL; JH819172; EKC22536.1; -; Genomic_DNA.
DR   EnsemblMetazoa; EKC22536; EKC22536; CGI_10002103.
DR   InParanoid; K1QLL9; -.
DR   OMA; IAVMSNT; -.
DR   OrthoDB; EOG091G1E1T; -.
DR   Proteomes; UP000005408; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005262; F:calcium channel activity; IEA:InterPro.
DR   CDD; cd00204; ANK; 1.
DR   Gene3D; 1.25.40.20; -; 1.
DR   InterPro; IPR020683; Ankyrin_rpt-contain_dom.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR013555; TRP_dom.
DR   InterPro; IPR002153; TRPC_channel.
DR   PANTHER; PTHR10117; PTHR10117; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   Pfam; PF08344; TRP_2; 1.
DR   PRINTS; PR01097; TRNSRECEPTRP.
DR   SUPFAM; SSF48403; SSF48403; 2.
PE   3: Inferred from homology;
KW   ANK repeat {ECO:0000256|SAAS:SAAS00933366};
KW   Complete proteome {ECO:0000313|Proteomes:UP000005408};
KW   Ion channel {ECO:0000256|SAAS:SAAS00931870};
KW   Ion transport {ECO:0000256|SAAS:SAAS00929079};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Receptor {ECO:0000313|EMBL:EKC22536.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005408};
KW   Repeat {ECO:0000256|SAAS:SAAS00931009};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|SAAS:SAAS00927442}.
FT   TRANSMEM    348    372       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    384    402       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    422    439       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    459    479       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    544    565       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    585    608       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    615    635       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    663    685       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      196    258       TRP_2. {ECO:0000259|Pfam:PF08344}.
FT   DOMAIN      412    699       Ion_trans. {ECO:0000259|Pfam:PF00520}.
SQ   SEQUENCE   788 AA;  89630 MW;  E2A02D120F890E4E CRC64;
     MTKKQKFVHI LSERLRPGLQ DVERKYLESC ELGDENFVKN VLNSGRVSAD IEDTQGRTGL
     DISIENGHVS LVDYLLSKVS PKVIHQGLLC AIEYDREEIC EILLNHPIYQ TTHKDKDGVK
     SNEYSTIQGI TSPNGVTTPD DDDLSMRSDI SKFSELPVFN MLKEALIKAA IRNDFQIVQM
     ITMKGALVDI PHDYFCSCTS CIEEQNRDYM VFCNRRLDTF RALASPAYIS LTDEDPVMSS
     FFLSKKFKQL QVMETEYKAS EYTYEELDLQ VQNFTLDLLN QCRTSEEVRS LLNSTEMADA
     NTNSFPLLQV ALQMEQKKFV SHPKCQAQVS ALWFSGLTGM RHLNRFEFLL LSIPLGMIFL
     PILSLVFIFV PWSKVTLLLN PPSTRFLSYT CSYITFLCLV VLGKIQFSNM WVSLGCEHSD
     PFTYVFITLI FMWIIGWIWE EMKQLFEQGA GNYFRSVWNI IDSLMLTFLL TSFTLDVLVP
     IRLQSSLAQH QINFNVSGEE ININQLLFCY DVDNKNNYFS TERQCPTATI GVDWATSWVP
     DPELISDIMF SAGIILSIAR ISFIMPANET FGTMLVSFRR TFGDLVKLLA MFVLILLSFS
     CGLAALYAAH ACQTAHFQGF SAVTFVLIWS LLGFGEGNTP NLNRSAPLSS ITNNSSRITL
     TEWFGYAIYG LYVFAAIVVL MNLLIAVMSN TFQEVQDERD TEWKFSRTEL WMTFIEPGCP
     VAPPFNIIPS IQNICEAWKK LCCLCSKSRC RTVKKQQVRT SIPNVVMFVD VFNITKNTIL
     KSNGITII
//
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