ID K1QU16_CRAGI Unreviewed; 2552 AA.
AC K1QU16;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE SubName: Full=Protein polybromo-1 {ECO:0000313|EMBL:EKC25031.1};
GN ORFNames=CGI_10018256 {ECO:0000313|EMBL:EKC25031.1};
OS Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea.
OX NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC25031.1};
RN [1] {ECO:0000313|EMBL:EKC25031.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC25031.1};
RX PubMed=22992520; DOI=10.1038/nature11413;
RA Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W., Paps J., Zhu Y.,
RA Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., Wen B.,
RA Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., Xu Z., Liu Y.,
RA Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., Cheng P., Jiang X.,
RA Li J., Fan D., Wang W., Fu W., Wang T., Wang B., Zhang J., Peng Z., Li Y.,
RA Li N., Wang J., Chen M., He Y., Tan F., Song X., Zheng Q., Huang R.,
RA Yang H., Du X., Chen L., Yang M., Gaffney P.M., Wang S., Luo L., She Z.,
RA Ming Y., Huang W., Zhang S., Huang B., Zhang Y., Qu T., Ni P., Miao G.,
RA Wang J., Wang Q., Steinberg C.E., Wang H., Li N., Qian L., Zhang G., Li Y.,
RA Yang H., Liu X., Wang J., Yin Y., Wang J.;
RT "The oyster genome reveals stress adaptation and complexity of shell
RT formation.";
RL Nature 490:49-54(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; JH818580; EKC25031.1; -; Genomic_DNA.
DR HOGENOM; CLU_228168_0_0_1; -.
DR InParanoid; K1QU16; -.
DR GO; GO:0016586; C:RSC-type complex; IEA:InterPro.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd04717; BAH_polybromo; 1.
DR CDD; cd19756; Bbox2; 1.
DR CDD; cd05524; Bromo_polybromo_I; 1.
DR CDD; cd05526; Bromo_polybromo_VI; 1.
DR CDD; cd21984; HMG-box_PB1; 1.
DR Gene3D; 2.30.30.490; -; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 6.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 2.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR037382; Rsc/polybromo.
DR InterPro; IPR000315; Znf_B-box.
DR PANTHER; PTHR16062:SF19; PROTEIN POLYBROMO-1; 1.
DR PANTHER; PTHR16062; SWI/SNF-RELATED; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF00439; Bromodomain; 6.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00439; BAH; 1.
DR SMART; SM00297; BROMO; 6.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF75011; 3-carboxy-cis,cis-mucoante lactonizing enzyme; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR SUPFAM; SSF47370; Bromodomain; 6.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51038; BAH; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 6.
DR PROSITE; PS50118; HMG_BOX_2; 1.
DR PROSITE; PS50119; ZF_BBOX; 1.
PE 4: Predicted;
SQ SEQUENCE 2552 AA; 291963 MW; 0C7C9A44B3B43B31 CRC64;
MLYVFTVQSV MTTLGLLLLF AGSVGGAGIH GIHDALTKGL CLCVADNDIY ARDGPGEEHK
VVAVLRQDDC FVSKGGYLHI FGATWYELLN VQNQVGWVNA YHLRVKDRTA CAVSATVSST
PFSITGSDPF SGGDIFRAGT CTEGGMCKEH QVHDQAKQPH PGVVRGAVTV GPHCPRGQGV
RVTPTLTRTI CQKMPGKRKR TSTIGSERQS EEREESPAPT SQKRKRKAQY DPVEICQELY
ETIKTYKGED GRLVCETFIR VPQRRAAADY YEVVATPIDL RKIQQKLKME EYEDIDQLTT
DVELLVSNAK LYYKKSSQEY KDAVELLEIY HETKSELLNE AFGEPEQPRV ERRRSTRQAA
QEVDEDEEED DAPVEKQSED VKDDPQEIEE LFAAAMNARD GDRDISLVFQ LLPQRSKYPE
YYKIIKNPID MKMIAQKIQG NMYNTLNEIE RDFFLMVKNA RTFNEPKSVI YKDAVEMKRI
VQKKKQEIIQ RKSMVPKPPE RVRTRNLQKM SAICAALKYP SDDEDDEASL DASLMDYDDD
SGAETIMSED DNLYVMLLNA VKNYKLSSGE TVHEPFIKLP SKRFYPDYYE EIVRPMSLSN
VRKKIKFNQY RNLEEVAADL NLVFDNARQY NADDSLLYQH AVILQKVMID KKRELERLET
NKDLGLDDMS SSQFDIPVMK ISRDYFDEDS QMSSSSKQRR SGGLSDSDKK RAKRATPEEM
MKRRLWTLYR SVFDATYPSE QHIINDFELM FNNARLYNEE DSLVYQDADQ LERVLKTRWK
QVCHVIESRR AALSKRYHRH KAKSQTLLPV RLQEMYDAVS NYQDPKGRDL ALPFLKLPLK
TDYPDYYEVI KKPIDMQKIL LKMQQNQYES IEDMTADFDA LTLQRLVLEK KMELADDGTN
DVPDVRALVM EMMTNLFIST YNHQDEEGRC YSDSFAELPE RDPDEDLETS KQREKPLSFD
QIKRNVEKGR YIRMDRFQED MFKVFERARR LSRTDSQLYE DAVEMQMFFI KQRDEICRNG
ERLLTPALSY QEKHLTVALD AEKQSKLEQE QKEDEDKQSK RESEERILDP DSTEKEGEDC
FKYKDETFRV GDFVYIEPRE KGLEAHIMCV EKLYTDNNAQ EHLHGNWFYR PNETFHLASR
KFLEKEVFKS DFYTSIPISQ VLGKCYVMYV KDYFKSKPEG FEDKDVYVCE SRYSNRHKSF
KKIKVWQIPG REQVPLLPRE IPLVPVRVSS VFASRKEEEV DDGDTSDTVY LKNSTEVPEI
SRVEKIFVIN NDVYFTGTAF VRPADIPHSP TRLFYRRELF LSSQETKYNL SGLVTDDEIF
FYKKPITPQK EPSPLLMKAA DDTFMDDSQD STLMDTLDDT NMSFDMEASH QGFPEIPTPK
PTKKGKNSMK RQISGYIVYS GEIRKIIQQE NPECTFGEIS RIVGGKWRNL NKEDKEKYEE
RAKRIAEEQL AKQQEATKAM NDSLQGQWDS SGGKGSPAPS NRPGTPGGMQ GQYQGHMVQG
LHNGVPRLPP HSGMSPGRQY MPPYHGTPTG MRPMTGGYPN TPPNSMLPGH LAGTPQGGMS
PYSLTPHPPG QGGGAVPPNM CYSISPPSLS ASGLSALQEM LRRPFNSPSP GATVSVTTAE
FYPTVETGQQ MAPPPPPPPP PRPPSPMFVS VPPRTQRLLH SEAYLRYIEG LRADKPFISD
WDKNLTANAE NTSTDPNRLP AHWLAEGPGY HGNTSNALWA LRDLMLKDTL NISRTLSFEA
LCSGGGCSWI CITFYIMNTA SSTYRIHKCS KCPGDTGYHC VSCPCDLCPQ CKENHVKDLN
TIDHDVVSHR DKINYIPTEE ICVGHPSKVY VNYCEPCKLP VCFHCRKHRN HRQVDVNRAY
KTKREQHRGT IHTIRSEALF YRPVLLTGIE ADFKTCRTEF SLYQSEMLTK AKTLKNLINR
VTKNFMYNVF CDFNFKHRCL KQKIEMSRHI NSLQRYIHRY EQPEFTFSPL QFLSSIKKAL
TEIHLMLHTS QLSMTESLKK EDVMESLSAI QIKERGTRRV ENQCLLKLMS SAEFHQSLTV
TGVDCSYHIS CVTSDRVWVS DRNNLILTNT KGVCLHCVEG DLFSDSGLHT LTNESELIYI
DCNDDINKLA KDINTTKTFI EKTDSTWEPR CVHWSPSTGD LLVGMSRKEP KEKEDKEDRD
NTADTEIITT WTGKVTRYDQ SGQLTQTIQY DNTGRKLYRD PLYITENNNG DVVVSDYKAV
VVTERGGRHL FSYTGHPSGS RLWPLGICTD PLSHILLCDD WTNAVQMLDQ DGQFLSHLLI
RPSGIFYPRS LSYDVNTHRL WVGSLYNNTV VIYRYITRQL ALTATADVTE SLNEIPTTGT
EKPQQVNECL LKMMSPPELL HSLTVTGVDG CLHISCVTSD RVWVNDGKVT RYDQSGRLTQ
TIQYDNTGRE LYTEPNYITE NNNGDVVVSD CYYTRSGAIL VTERGGRHRF SYTGHPSGSG
LEPRGICTDP LSHILVCDAK TDKVHILDKD GQFLSHLLIN PLGKFGPCSL SYDVNTHHLW
VGSRYNSSTV LIYRYITRQD TLTDVLVLFG NF
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