ID K1XDU6_9BACT Unreviewed; 479 AA.
AC K1XDU6;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Radical SAM protein {ECO:0000313|EMBL:EKD28400.1};
GN ORFNames=ACD_79C00311G0006 {ECO:0000313|EMBL:EKD28400.1};
OS uncultured bacterium.
OC Bacteria; environmental samples.
OX NCBI_TaxID=77133 {ECO:0000313|EMBL:EKD28400.1};
RN [1] {ECO:0000313|EMBL:EKD28400.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23019650; DOI=10.1126/science.1224041;
RA Wrighton K.C., Thomas B.C., Sharon I., Miller C.S., Castelle C.J.,
RA VerBerkmoes N.C., Wilkins M.J., Hettich R.L., Lipton M.S., Williams K.H.,
RA Long P.E., Banfield J.F.;
RT "Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated
RT bacterial phyla.";
RL Science 337:1661-1665(2012).
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKD28400.1}.
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DR EMBL; AMFJ01034780; EKD28400.1; -; Genomic_DNA.
DR AlphaFoldDB; K1XDU6; -.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0031419; F:cobalamin binding; IEA:InterPro.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR CDD; cd01335; Radical_SAM; 1.
DR CDD; cd02068; radical_SAM_B12_BD; 1.
DR Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR InterPro; IPR006158; Cobalamin-bd.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR034466; Methyltransferase_Class_B.
DR InterPro; IPR007197; rSAM.
DR InterPro; IPR023404; rSAM_horseshoe.
DR PANTHER; PTHR43409; ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED; 1.
DR PANTHER; PTHR43409:SF12; BLL1977 PROTEIN; 1.
DR Pfam; PF02310; B12-binding; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR SFLD; SFLDG01123; methyltransferase_(Class_B); 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51332; B12_BINDING; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00022485};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00022485};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022485}.
FT DOMAIN 19..151
FT /note="B12-binding"
FT /evidence="ECO:0000259|PROSITE:PS51332"
FT DOMAIN 197..421
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 479 AA; 55097 MW; 6A320702479E044F CRC64;
MKIPIEVKKI ALIYSPIAEG LALLSTVQKV QRRPGLGLRY IKSILLEQNI DVDLYDNLYD
VNAADVLFNI LNQKKYDLIG FHTTSASIPS VLKTISKLNS EWYSGRIIAG GPGTLHFKKL
LESGIDVIVF GEGEETIKHV INGLKGNCSL NTISGIAFYE NNNLIITNKS DIVDLNRIPY
PYWEKNNNKI YGDLFNITIK KPYYVVMASR GCPFNCSFCS THLYWRKKYR LREVNNVIDE
IKFLITKRNA KYIHFLDDIF GLNPKWIEEF IIEVKKTKLK FNFSIVLHPM SYRNNRYSIF
SGLKDIGCSL ISFGAQSANK DILKNINRLE CEPQELEDAI SKTNNLNIVS VLTYILGLPG
ETRETIKETL QFVNKVKPTI VDFHPLLYLP GSEIVESFSK DQYCKISDSE LSRLCLYSSF
NYYILHGGLV RVLMYIVKNN LSWFLNLFDI ISYIFQFMKQ INSKSLTTKY FDKLNSKIN
//