ID K3XUT4_SETIT Unreviewed; 1448 AA.
AC K3XUT4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN Name=101768943 {ECO:0000313|EnsemblPlants:KQL09343};
GN ORFNames=SETIT_4G038900v2 {ECO:0000313|EMBL:RCV20223.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL09343, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV20223.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL09343,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV20223.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV20223.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV20223.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL09343}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL09343};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; AGNK02002207; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003531; RCV20223.1; -; Genomic_DNA.
DR RefSeq; XP_012701090.1; XM_012845636.1.
DR RefSeq; XP_012701091.1; XM_012845637.1.
DR RefSeq; XP_012701092.1; XM_012845638.1.
DR RefSeq; XP_012701093.1; XM_012845639.1.
DR RefSeq; XP_012701094.1; XM_012845640.1.
DR RefSeq; XP_012701095.1; XM_012845641.1.
DR RefSeq; XP_012701096.1; XM_012845642.1.
DR RefSeq; XP_012701097.1; XM_012845643.1.
DR STRING; 4555.K3XUT4; -.
DR EnsemblPlants; KQL09343; KQL09343; SETIT_005691mg.
DR GeneID; 101768943; -.
DR Gramene; KQL09343; KQL09343; SETIT_005691mg.
DR KEGG; sita:101768943; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_001756_0_0_1; -.
DR InParanoid; K3XUT4; -.
DR OMA; VWNALIQ; -.
DR OrthoDB; 1210356at2759; -.
DR Proteomes; UP000004995; Chromosome IV.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF17; OS12G0638900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 18.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 223..257
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 258..294
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 295..329
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 330..364
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 365..399
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 400..434
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 435..469
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 470..504
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 505..539
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 714..748
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 784..818
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 854..888
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 889..923
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 924..958
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 942..1071
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 959..993
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 994..1028
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1029..1063
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1099..1133
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 67..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1416..1448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..40
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1448 AA; 162104 MW; 0C3C30663D25178A CRC64;
MSLMAAASPP FPFPSSSSSS TRHLRRAATT TASAASSTSD EFDYPLVDPS VRWPHLRFPH
LPAPRFPAAT VPAAPPAPAR PPRVEDDDDP AETPASASAL VEPLDARAHR GRVKRLSKLA
LRRARDWRAR VAGLADAVLA LAPGAPVDDV LEGARAAPDE VSLVVRTVGE SSWRRALDVF
EWLARSGAPA PRAVAVVIGV LGRARQDAVA EELFLRFAGE GATVQVFNAM MGVYARSGRF
DDARQLLDTM HERGIEPDLV SFNTLINARA KSGCLAAGVA LDLLFEVRQA GLRPDVITYN
TLISACSQSS NLEDAVTVFE EMMASECRPD LWTYNAMVSV HGRCGKAEEA ERLFGELVEK
GFMPDAVTYN SLLYAFAKEG DVDKVERTCE DLVKAGFRKN EITYNTMIHM YGKMGRLDLL
VGLYDEMRSM GCTPDSVTYT VLIDSLGKMD RIAEAGKVLE EMAAAGLKPT LVTFSALICA
YAKGGRWAES EKTFDCMVAS GVKPDRLAYL VMLDVFARSG ETEKLLDLYR KMMKDSYRPD
DGLYQVLLAA LAKEDKHEEI EEVIQDMELL CQMNPGIIST ILIKARCISQ GAKLLKKACL
QGYKPDIKSL RSIMDAYVTT EKQEEGLSLL ECIREHVSSS HDLISEFSVM LLCRKQTSIA
AYEEYNRMQM FKYESFGRNC NLYEYLITCL EEAEFFSEAC QVYCDMQFIG IEASKNIYES
MISTYCKLGF PETAHRLMDD ALQSGIPLNV LRSRVLIIEA YGKIKLWQQA EILVKGLRQS
SGIDRRIWNA LIHAYAESGL YEKARAVFDN MIKAGPLPTV DSINGMMRAL IVDGRLDELY
VVVQELQDMD FKISKSTVLL MLDAFAKGGD VFEVMKIYNG MKAAGYLPNM HLYRSMISLL
CRHNRSRDVE LMIAEMEAAG FKPDVAILNA LLMMYTATGN FDRTIQVYQS ILEAGLEPDE
DTYNTLIVMY CRNFRPEEGF TLLNEMGKRG LIPKLQSYKS LLAASAKAEL REQADQLFEE
MRSKGYQLNR SIYHMMMKNY RNAGNHSKAE NLLSVMREDG IEPTIATMHI LMTSYGTAGH
PREAENVLNS LKSSSLEVST LPYSTVFDAY LKNGDYELGI TKLLEMKRDG VEPDHQVWTC
FIRAASLCEQ TDDAILLLNS LKDCGFELPI RLLTERTPSV LSEVANYLEE LEALEDSAAL
NFVNALEDLL WAFECRATAS WIFQLAVKRN IYRDNVFRVV EKDWGADFRK LSAGAALVGL
TLWLDHMQDA SLQGSPESPK SIVMVTGEGE YNMVSLRKTI RAYLLEMGSP FLPCRVRSGR
FVVKAYSLKM WLKDSPFCMD LELKDVPALP KLNSMKLIDG YFMRAGLVSA FKDIHERLGE
VWPKKFSKLA LLSEESRDEA IKADIQGRKE KLDRMKKKDL VTARNSKRRP QRAKFVREQG
QSMKAVSK
//