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Database: UniProt
Entry: K3XUT4_SETIT
LinkDB: K3XUT4_SETIT
Original site: K3XUT4_SETIT 
ID   K3XUT4_SETIT            Unreviewed;      1448 AA.
AC   K3XUT4;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 60.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN   Name=101768943 {ECO:0000313|EnsemblPlants:KQL09343};
GN   ORFNames=SETIT_4G038900v2 {ECO:0000313|EMBL:RCV20223.1};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL09343, ECO:0000313|Proteomes:UP000004995};
RN   [1] {ECO:0000313|EMBL:RCV20223.1, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL09343,
RC   ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC   {ECO:0000313|EMBL:RCV20223.1};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EMBL:RCV20223.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV20223.1};
RA   Noorani M.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQL09343}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL09343};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; AGNK02002207; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM003531; RCV20223.1; -; Genomic_DNA.
DR   RefSeq; XP_012701090.1; XM_012845636.1.
DR   RefSeq; XP_012701091.1; XM_012845637.1.
DR   RefSeq; XP_012701092.1; XM_012845638.1.
DR   RefSeq; XP_012701093.1; XM_012845639.1.
DR   RefSeq; XP_012701094.1; XM_012845640.1.
DR   RefSeq; XP_012701095.1; XM_012845641.1.
DR   RefSeq; XP_012701096.1; XM_012845642.1.
DR   RefSeq; XP_012701097.1; XM_012845643.1.
DR   STRING; 4555.K3XUT4; -.
DR   EnsemblPlants; KQL09343; KQL09343; SETIT_005691mg.
DR   GeneID; 101768943; -.
DR   Gramene; KQL09343; KQL09343; SETIT_005691mg.
DR   KEGG; sita:101768943; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_001756_0_0_1; -.
DR   InParanoid; K3XUT4; -.
DR   OMA; VWNALIQ; -.
DR   OrthoDB; 1210356at2759; -.
DR   Proteomes; UP000004995; Chromosome IV.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 15.
DR   PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR   PANTHER; PTHR47447:SF17; OS12G0638900 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 4.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF17177; PPR_long; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 18.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          223..257
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          258..294
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          295..329
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          330..364
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          365..399
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          400..434
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          435..469
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          470..504
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          505..539
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          714..748
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          784..818
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          854..888
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          889..923
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          924..958
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          942..1071
FT                   /note="Pentacotripeptide-repeat region of PRORP"
FT                   /evidence="ECO:0000259|Pfam:PF17177"
FT   REPEAT          959..993
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          994..1028
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          1029..1063
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          1099..1133
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          67..97
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1416..1448
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        11..40
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1448 AA;  162104 MW;  0C3C30663D25178A CRC64;
     MSLMAAASPP FPFPSSSSSS TRHLRRAATT TASAASSTSD EFDYPLVDPS VRWPHLRFPH
     LPAPRFPAAT VPAAPPAPAR PPRVEDDDDP AETPASASAL VEPLDARAHR GRVKRLSKLA
     LRRARDWRAR VAGLADAVLA LAPGAPVDDV LEGARAAPDE VSLVVRTVGE SSWRRALDVF
     EWLARSGAPA PRAVAVVIGV LGRARQDAVA EELFLRFAGE GATVQVFNAM MGVYARSGRF
     DDARQLLDTM HERGIEPDLV SFNTLINARA KSGCLAAGVA LDLLFEVRQA GLRPDVITYN
     TLISACSQSS NLEDAVTVFE EMMASECRPD LWTYNAMVSV HGRCGKAEEA ERLFGELVEK
     GFMPDAVTYN SLLYAFAKEG DVDKVERTCE DLVKAGFRKN EITYNTMIHM YGKMGRLDLL
     VGLYDEMRSM GCTPDSVTYT VLIDSLGKMD RIAEAGKVLE EMAAAGLKPT LVTFSALICA
     YAKGGRWAES EKTFDCMVAS GVKPDRLAYL VMLDVFARSG ETEKLLDLYR KMMKDSYRPD
     DGLYQVLLAA LAKEDKHEEI EEVIQDMELL CQMNPGIIST ILIKARCISQ GAKLLKKACL
     QGYKPDIKSL RSIMDAYVTT EKQEEGLSLL ECIREHVSSS HDLISEFSVM LLCRKQTSIA
     AYEEYNRMQM FKYESFGRNC NLYEYLITCL EEAEFFSEAC QVYCDMQFIG IEASKNIYES
     MISTYCKLGF PETAHRLMDD ALQSGIPLNV LRSRVLIIEA YGKIKLWQQA EILVKGLRQS
     SGIDRRIWNA LIHAYAESGL YEKARAVFDN MIKAGPLPTV DSINGMMRAL IVDGRLDELY
     VVVQELQDMD FKISKSTVLL MLDAFAKGGD VFEVMKIYNG MKAAGYLPNM HLYRSMISLL
     CRHNRSRDVE LMIAEMEAAG FKPDVAILNA LLMMYTATGN FDRTIQVYQS ILEAGLEPDE
     DTYNTLIVMY CRNFRPEEGF TLLNEMGKRG LIPKLQSYKS LLAASAKAEL REQADQLFEE
     MRSKGYQLNR SIYHMMMKNY RNAGNHSKAE NLLSVMREDG IEPTIATMHI LMTSYGTAGH
     PREAENVLNS LKSSSLEVST LPYSTVFDAY LKNGDYELGI TKLLEMKRDG VEPDHQVWTC
     FIRAASLCEQ TDDAILLLNS LKDCGFELPI RLLTERTPSV LSEVANYLEE LEALEDSAAL
     NFVNALEDLL WAFECRATAS WIFQLAVKRN IYRDNVFRVV EKDWGADFRK LSAGAALVGL
     TLWLDHMQDA SLQGSPESPK SIVMVTGEGE YNMVSLRKTI RAYLLEMGSP FLPCRVRSGR
     FVVKAYSLKM WLKDSPFCMD LELKDVPALP KLNSMKLIDG YFMRAGLVSA FKDIHERLGE
     VWPKKFSKLA LLSEESRDEA IKADIQGRKE KLDRMKKKDL VTARNSKRRP QRAKFVREQG
     QSMKAVSK
//
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