GenomeNet

Database: UniProt
Entry: K3XVU5_SETIT
LinkDB: K3XVU5_SETIT
Original site: K3XVU5_SETIT 
ID   K3XVU5_SETIT            Unreviewed;       633 AA.
AC   K3XVU5;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 50.
DE   RecName: Full=PA domain-containing protein {ECO:0000259|Pfam:PF02225};
GN   Name=101774188 {ECO:0000313|EnsemblPlants:KQL11056};
GN   ORFNames=SETIT_4G186000v2 {ECO:0000313|EMBL:RCV22014.1};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV22014.1};
RN   [1] {ECO:0000313|EMBL:RCV22014.1, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL11056,
RC   ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC   {ECO:0000313|EMBL:RCV22014.1};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EMBL:RCV22014.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV22014.1};
RA   Noorani M.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQL11056}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL11056};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
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DR   EMBL; AGNK02002562; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM003531; RCV22014.1; -; Genomic_DNA.
DR   RefSeq; XP_004965628.1; XM_004965571.3.
DR   AlphaFoldDB; K3XVU5; -.
DR   STRING; 4555.K3XVU5; -.
DR   EnsemblPlants; KQL11056; KQL11056; SETIT_006053mg.
DR   GeneID; 101774188; -.
DR   Gramene; KQL11056; KQL11056; SETIT_006053mg.
DR   KEGG; sita:101774188; -.
DR   eggNOG; ENOG502QQUF; Eukaryota.
DR   InParanoid; K3XVU5; -.
DR   OMA; VPAMGRF; -.
DR   OrthoDB; 305396at2759; -.
DR   Proteomes; UP000004995; Chromosome IV.
DR   ExpressionAtlas; K3XVU5; baseline.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   CDD; cd02125; PA_VSR; 1.
DR   Gene3D; 3.50.30.30; -; 1.
DR   Gene3D; 2.10.25.10; Laminin; 1.
DR   InterPro; IPR018097; EGF_Ca-bd_CS.
DR   InterPro; IPR046450; PA_dom_sf.
DR   InterPro; IPR003137; PA_domain.
DR   PANTHER; PTHR22702; PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR22702:SF1; PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF02225; PA; 1.
DR   SUPFAM; SSF52025; PA domain; 1.
DR   PROSITE; PS01187; EGF_CA; 1.
PE   4: Predicted;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   EGF-like domain {ECO:0000256|ARBA:ARBA00022536};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..25
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           26..633
FT                   /note="PA domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5010126131"
FT   TRANSMEM        568..591
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          63..160
FT                   /note="PA"
FT                   /evidence="ECO:0000259|Pfam:PF02225"
SQ   SEQUENCE   633 AA;  70102 MW;  3E95E99001B88D84 CRC64;
     MARRAPWLAS VVAAQLLLLI VAVRGRFVVE KSSVRVLAPE HIRGHHDAAI GNFGVPDYGG
     TLTGVVIYPD KKATGCAEFD TKFKSKSRRP VILLLDRGDC FFALKAWNAQ RAGAAAVLIA
     DSVDEQLLTM DSPEASPGTE YIDKINIPSA LVNRAFGESL KKMAQKVAAG DAAGEEVVVK
     LDWRESMPHP DERVEYELWT NSNDECGARC DEQAEFIRGF RGHAQLLERG GYARFTPHYI
     TWYCPEAFRL TQQCKSQCIN HGRYCAPDPE QDFGSGYDGK DVVVENLRQL CVHRVANESG
     RPWAWWDYVM DYKIRCSMKE KKYSKTCAED VVAALGLDLK KVLECMGDPE ADAENAVLSK
     EQEDQIGSGS RGDVTILPTL VINNVQYRGK LERTAVLKAV CAGFKEGTEP RVCLSPDIET
     NECLRRNGGC WRDEATNVTA CRDTYRGRVC ECPVVNGVRY EGDGYTDCQA VGPGRCALNN
     GGCWSETIGS HTFSACSETA LTGCRCPPGF HGDGHKCEDL DECREKLACT CPDCHCKNTW
     GNYECTCSGN QLYIRGEDVC VANGMSKLGW FITLVAVACV AGVGIAGYVF YKYRLRSYMD
     SEIMSIMSQY MPLDSQNNEN QPLRQHDSEA LRH
//
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