ID K3Z3S3_SETIT Unreviewed; 865 AA.
AC K3Z3S3;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN Name=101777675 {ECO:0000313|EnsemblPlants:KQL14205};
GN ORFNames=SETIT_3G137300v2 {ECO:0000313|EMBL:RCV16428.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV16428.1};
RN [1] {ECO:0000313|EMBL:RCV16428.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL14205,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV16428.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV16428.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV16428.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL14205}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL14205};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGNK02001534; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003530; RCV16427.1; -; Genomic_DNA.
DR EMBL; CM003530; RCV16428.1; -; Genomic_DNA.
DR RefSeq; XP_004961142.1; XM_004961085.1.
DR RefSeq; XP_012700439.1; XM_012844985.1.
DR AlphaFoldDB; K3Z3S3; -.
DR STRING; 4555.K3Z3S3; -.
DR EnsemblPlants; KQL14205; KQL14205; SETIT_021191mg.
DR GeneID; 101777675; -.
DR Gramene; KQL14205; KQL14205; SETIT_021191mg.
DR KEGG; sita:101777675; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; K3Z3S3; -.
DR OMA; INNRCFE; -.
DR OrthoDB; 1200295at2759; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009658; P:chloroplast organization; IEA:EnsemblPlants.
DR GO; GO:0009416; P:response to light stimulus; IEA:EnsemblPlants.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF204; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 154..188
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 255..289
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 356..390
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 426..460
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 557..591
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 592..622
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 785..861
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 865 AA; 95331 MW; 813D2FEAD2171BDB CRC64;
MPPPPTKPAL NPPLLPLASL PSPRALPPTR LHRFSPEKRP RRLSSAAVSA AAPTSSSADP
SAELRALCSH GQLAQALWLL ESSAEPPDED AYVALFRLCE WRRAVEPGLR ACAHADDRHA
WFGLRPGNAM LSMLIRFGET WHAWRVFAKM PERDVFSWNV MVGGYGKAGL LEEALDLYHR
MMWAGVRPDV YTFPCVLRSC GGVPDWRMGR EVHAHVLRFG FGGEVDVLNA LMTMYAKCGD
AVGARKVFDS MTVMDCISWN AMIAGHFENG ECNTGLELFL TMLEEEVQPN LMTITSVTVA
SGLLTDVSFA MEMHGLAVKR GFATDVAFCN SLIQMYASLG MMGQARTVFS RMDTRDAMSW
TAMISGYEKN GFPDKALEVY ALMEVNNVSP DDITIASALA ACACLGRLDV GVKLHELAES
KGFMSYIVVA NALLEMYAKS KHIDKAIEVF KCMPEKDVVS WSSMIAGFCF NHRNFEALYY
FRHMLADLKP NSVTFIAALA ACAATGALRS GKEIHAHVLR CGIGSEGYLP NALIDLYVKC
GQTGYAWAQF CVHGAKDVVS WNIMLAGFVA HGHGDTALSF FNQMVKTGEC PDEVTFVTLL
CACSRGGMVN EGWELFHSMT EIYSVVPNLK HYACMVDLLS RAGQLTEAYN FINEMPITPD
AAVWGALLNG CRIHRHVELG ELAAKYVLEL EPNDAGYHVL LCDIYADAGR WDKLSRVRKT
MRDKGLDDDS GCSWVEVKGV VHAFLTGDES HPQIREINTV LEGIYERMKA SGCAPVESHS
PEDKEVSKDD IFCGHSERLA VAFGLINTAP GTPVSVTKNQ YTCQSCHRIL KMISNIVRRD
IIVRDSKQLH HFKDGCCTCG DEGYG
//
