ID K3ZDH1_SETIT Unreviewed; 553 AA.
AC K3ZDH1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL14658, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQL14658, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL14658,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQL14658}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL14658};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02001591; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K3ZDH1; -.
DR EnsemblPlants; KQL14658; KQL14658; SETIT_024607mg.
DR Gramene; KQL14658; KQL14658; SETIT_024607mg.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_2_1; -.
DR InParanoid; K3ZDH1; -.
DR OMA; MENARET; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 21..51
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 52..86
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 114..148
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 246..280
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 461..553
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 553 AA; 62249 MW; 80C43A3FFFB7CC56 CRC64;
LGRLGRLSEA REVFDAMPFR DIIAWNSMIS AYCNNGMPDA ARSLADAISG GNLRTGTILL
SGYGRAGRVR DARRVFDEMP VRNTVAWNAM VTCYVQNGDV TLARRLFDAM PCRDVSSWNA
MLTGYCHSRQ MVDARNLFEQ MPERNTVSWT VMISGYVLIE QHGKAWDMFR MMHYDGMSPE
QPNLVSVLSA ISHLGNLNIL ESIHVLVHKA GFERDVVIGT AMLNAYTRGC GSADSLKVFD
SMEERDIFTW NTVITGYAQH GLGREAIRIY QQMESAGVLP NEVTFVGLLH ACSHSGLVDV
GRQFFKSMSC DYGLTPLLEH YACMVDLLGR AGDVQGAEQF IYDMPIEPDA VIWSALLGAC
KIHKNVHIGR RAAEKLFSIE PSNAGNYVML SNIYSSQGMW DEVAKVRKLM KEQGVNKEPG
CSWMQIKNRM HSFVTGDEEH EQIQDIYATL QELYTLLKAT GYVPDTEFVL HDIDEEQKES
SLLYHSEKLA VAYGLLVTPK GMPIQIMKNL RICGDCHSFI KFVSHVTKRE IDIRDGNRFH
HFRNGNCSCG DFW
//
