ID K3ZEP4_SETIT Unreviewed; 719 AA.
AC K3ZEP4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101781323 {ECO:0000313|EnsemblPlants:KQL12837};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL12837, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQL12837, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL12837,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQL12837}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL12837};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02001403; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_004963385.1; XM_004963328.2.
DR AlphaFoldDB; K3ZEP4; -.
DR EnsemblPlants; KQL12837; KQL12837; SETIT_025040mg.
DR GeneID; 101781323; -.
DR Gramene; KQL12837; KQL12837; SETIT_025040mg.
DR KEGG; sita:101781323; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_10_1; -.
DR InParanoid; K3ZEP4; -.
DR OMA; HSHIDDC; -.
DR OrthoDB; 445679at2759; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 85..120
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 187..221
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 393..427
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 494..528
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 529..563
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 719 AA; 77673 MW; 3BE2FBF55F77F002 CRC64;
MSSRLGFYNL EPALAAAAES LFRSGSPPRA VLRRARALHA LLVVSSLPSA PRPATFLVNQ
LLALYCRHSA VADALALLRA TPFPSVVSYN TVLSALSRAP RHVPDAFGLF RGLYASGLRP
TAPSLCAVLR AAGALRDGRA GAAVHSQALA LGFLASDIVP TALLQMYSGC GSPRDADQVF
DEMTTPDVVA WNCVMHCNVR YGYLGRALRK FCRMVSIGLA PTESTFSSVL SGCGRSGDSH
HGRALHGWVV KSEELDPDLP LQNALLDMYC CCGDLDTALC VFQRIETPDL VSWNTIIAGF
SSVGDGWGAI QAFVQLKAVS GEQLAPDEYT FAAVVSAAAA LPAMCSGKLL HADVIKAGLE
SSVFVANTLI NMYFTNEEPG SAQILFDSIR VKDVIMWTEM VAGHSALGEG ELALKYFISM
LEEGHKVDNF SLSSALNSTA DLAGLKQGEM LHAQVVKSGH EGNICVSGSL IDMYAKNGTL
GGAYSVFCTI QKPDLKCWNS MIGGYGNHGD SEMAFKLFDD MIRGGLQPDH VTYISLLSAC
SHCGLVEKGK LYWFSMMSDG IVPGFKHYTS MVSLLSRTGV LEEAADLIDR SPSAKRYPEL
WRILLSSCVT FKDLSIGVHA AQQALEQDPD DISTLILLSN LYASIGKWDN VSEIRRRIRG
LTTEKEPGLS WIELEKMVHV FSADDECHTE IGDCRDELLR VKANMELLDS CENDLVSNG
//