GenomeNet

Database: UniProt
Entry: K3ZEP4_SETIT
LinkDB: K3ZEP4_SETIT
Original site: K3ZEP4_SETIT 
ID   K3ZEP4_SETIT            Unreviewed;       719 AA.
AC   K3ZEP4;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=101781323 {ECO:0000313|EnsemblPlants:KQL12837};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL12837, ECO:0000313|Proteomes:UP000004995};
RN   [1] {ECO:0000313|EnsemblPlants:KQL12837, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL12837,
RC   ECO:0000313|Proteomes:UP000004995};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EnsemblPlants:KQL12837}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL12837};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AGNK02001403; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_004963385.1; XM_004963328.2.
DR   AlphaFoldDB; K3ZEP4; -.
DR   EnsemblPlants; KQL12837; KQL12837; SETIT_025040mg.
DR   GeneID; 101781323; -.
DR   Gramene; KQL12837; KQL12837; SETIT_025040mg.
DR   KEGG; sita:101781323; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_10_1; -.
DR   InParanoid; K3ZEP4; -.
DR   OMA; HSHIDDC; -.
DR   OrthoDB; 445679at2759; -.
DR   Proteomes; UP000004995; Chromosome III.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 2.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          85..120
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          187..221
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          393..427
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          494..528
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          529..563
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   719 AA;  77673 MW;  3BE2FBF55F77F002 CRC64;
     MSSRLGFYNL EPALAAAAES LFRSGSPPRA VLRRARALHA LLVVSSLPSA PRPATFLVNQ
     LLALYCRHSA VADALALLRA TPFPSVVSYN TVLSALSRAP RHVPDAFGLF RGLYASGLRP
     TAPSLCAVLR AAGALRDGRA GAAVHSQALA LGFLASDIVP TALLQMYSGC GSPRDADQVF
     DEMTTPDVVA WNCVMHCNVR YGYLGRALRK FCRMVSIGLA PTESTFSSVL SGCGRSGDSH
     HGRALHGWVV KSEELDPDLP LQNALLDMYC CCGDLDTALC VFQRIETPDL VSWNTIIAGF
     SSVGDGWGAI QAFVQLKAVS GEQLAPDEYT FAAVVSAAAA LPAMCSGKLL HADVIKAGLE
     SSVFVANTLI NMYFTNEEPG SAQILFDSIR VKDVIMWTEM VAGHSALGEG ELALKYFISM
     LEEGHKVDNF SLSSALNSTA DLAGLKQGEM LHAQVVKSGH EGNICVSGSL IDMYAKNGTL
     GGAYSVFCTI QKPDLKCWNS MIGGYGNHGD SEMAFKLFDD MIRGGLQPDH VTYISLLSAC
     SHCGLVEKGK LYWFSMMSDG IVPGFKHYTS MVSLLSRTGV LEEAADLIDR SPSAKRYPEL
     WRILLSSCVT FKDLSIGVHA AQQALEQDPD DISTLILLSN LYASIGKWDN VSEIRRRIRG
     LTTEKEPGLS WIELEKMVHV FSADDECHTE IGDCRDELLR VKANMELLDS CENDLVSNG
//
DBGET integrated database retrieval system