ID K3ZRG8_SETIT Unreviewed; 633 AA.
AC K3ZRG8;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN Name=101769808 {ECO:0000313|EnsemblPlants:KQL22129};
GN ORFNames=SETIT_2G001800v2 {ECO:0000313|EMBL:RCV09132.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL22129, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV09132.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL22129,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV09132.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV09132.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV09132.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL22129}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL22129};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02000624; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003529; RCV09132.1; -; Genomic_DNA.
DR RefSeq; XP_004955321.1; XM_004955264.1.
DR AlphaFoldDB; K3ZRG8; -.
DR EnsemblPlants; KQL22129; KQL22129; SETIT_029198mg.
DR GeneID; 101769808; -.
DR Gramene; KQL22129; KQL22129; SETIT_029198mg.
DR KEGG; sita:101769808; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; K3ZRG8; -.
DR OMA; ADCHAVM; -.
DR OrthoDB; 447814at2759; -.
DR Proteomes; UP000004995; Chromosome II.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1903; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 91..125
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 221..255
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 324..358
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 541..633
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 633 AA; 68602 MW; FA366FA83F048D8E CRC64;
MSTAAAALLP SPGPARQSPA GGQHATLTAD RAAALLAGCA SARRASELHA AAVRAGVDRD
KAVDFRLQRA YAASGRLDLA VALLRRAPDP TAVFYTSAIH AHSSRGLHLP ALALLSDMLS
RGLLPTAHTL SASLPACNGL AFGRALHGYA VKLALSGDSY VATALLGMYA RAGDAAAARA
LFDEMQPEPH VVSVTAMLTC YTKMGALDDA RSLFDGLPRK DFICWNAMID GYTQHGRPNE
ALRLFRRMLR SDVEPDEVSV VLALSAVAQL GMTESGRWLH SFVKNSPRVR LNARVGTALI
DMYYKCGSLE DAVAVFNGLN DGKDIVVWNA MINGYAMHGH SRKAIEMFSQ LRAQGLWPTD
ITFIGVLNAC SHSGLVDEGR KLFKSMEQEY GIEPKIEHYG CMVDLLGRAG LIEEAFDLVQ
SMKKVKPDAV MWVSLLAACR LHKNMALGQR IADYLVANGL ANSGMYVLLS NIYAAVGNWR
EVGRVRSMMK ASGIQKEPGC SAIEVGRRVS EFVAGDTSHP RTDEIYAKLE EVMSVVVREH
GHVPQTELVL HDLDEAAKEK ALAVHSEKLA VAFGLISTPP GETIKIVKNL RACADCHAVM
KLVSKITGRR IVFRDRNRFH HFVDGACSCG DYW
//
