ID K4A609_SETIT Unreviewed; 797 AA.
AC K4A609;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK87867, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQK87867, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK87867,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQK87867}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK87867};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02005453; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K4A609; -.
DR EnsemblPlants; KQK87867; KQK87867; SETIT_034313mg.
DR Gramene; KQK87867; KQK87867; SETIT_034313mg.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; K4A609; -.
DR OMA; MQACNVE; -.
DR Proteomes; UP000004995; Chromosome IX.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015:SF1832; OS03G0241800 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 82..112
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 358..388
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 389..423
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 459..489
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 490..524
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 705..797
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 797 AA; 87891 MW; BD883A9FC88BD563 CRC64;
MLCPRRGIRA YAATALLTGR NLIAIILPPR RRLPCARAML LPRVHLRLAS TAAVRLHPPP
SGAFSHDLAF ARQVLDRIPA PDARAYNALI RAYSWRGPFH AAIDLYRSML RRVAPNKYTF
PFVLKACSAL ADLRSGRAVH AHAAAAGLHT DLFVSTALID LYIRCARFGP AANVFAKMPT
RDVVAWNAML AGYAQHGMYQ HAIAHLLDMQ AYDRLRPNAS TLVSLLPLLA QHEALSRGTS
VHAYCLRACL DQKEEQVLVG TALLDMYAKC KRLVYACRVF HGMPVRNEVT WSALIGGFVM
CDRMVQAFSL FKDMLSQGLC FLSPTSVASA LRVCASLADV CMGTQLHALL VKSGIHADLT
AGNSLLSMYA KAGLIDETMS LFDEMSIKDT VSYSALLSGY VQNGKAEEAF LVFKKMQACN
VEPDVATMVS LIPACSHLAA LQHGRCSHCS VIIRGLASET SICNALIDMY AKCGRIDLSR
QVFDKMAARD IVSWNTMIAG YGIHGLGKEA TTLFLGMKNQ GFAPDDVTFI CLISACSHSG
LVTEGKHWFN MMTQKYGILP RMEHYICMVD LLARGGFLDE AYQFIQSMPL KADVRVWGAL
LGACRIHKNI DLGKQVSRMI QKLGPEGTGN FVLLSNIFSA AGRFNEAAEV RVIQKVKGFK
KSPGCSWIEI NGSLHAFVGG DQSHPRSPDI YQELDNILID IKKLGYQADT SFVLQDLEEE
EKEKALLCHS EKLAIAFGIL SLGEDKTIFV TKNLRVCGDC HTAIKYMTLV RNRSIIVRDA
NRFHHFKNGQ CSCGDFW
//
