ID K4ABY8_SETIT Unreviewed; 351 AA.
AC K4ABY8;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK89386, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQK89386, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK89386,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQK89386}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK89386};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02005680; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K4ABY8; -.
DR STRING; 4555.K4ABY8; -.
DR EnsemblPlants; KQK89386; KQK89386; SETIT_036395mg.
DR Gramene; KQK89386; KQK89386; SETIT_036395mg.
DR eggNOG; KOG1911; Eukaryota.
DR HOGENOM; CLU_035097_0_0_1; -.
DR InParanoid; K4ABY8; -.
DR OMA; FIKWNGW; -.
DR Proteomes; UP000004995; Chromosome IX.
DR GO; GO:0031507; P:heterochromatin formation; IEA:InterPro.
DR CDD; cd00024; CD_CSD; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR044251; LHP1-like.
DR PANTHER; PTHR47240; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR PANTHER; PTHR47240:SF2; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR Pfam; PF00385; Chromo; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 71..130
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 231..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..55
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..175
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 231..254
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 269..317
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 351 AA; 38651 MW; 9941EADE22C14BA0 CRC64;
MGRSRKDSGD LAEALEEDEE EAEEQTEGEE EEGEEEEQTE EGEGEEDEAE AEAETPAQDA
VDPPKLAEGY FEIEAIRRRR LRKGQLQYLV KWRGWPESAN TWEPLENLKA CSDIVDAFDK
RSRSPRSSRK RKRKAATTST SDPNPSRGKR GRPPRSEARS MTGHHAPEPK KMPCRTSSRR
ASNNGNKSLF GGLEASVNVL GQRVVQEGSS GVVSVGFPSQ GAPLSVSLTD QQDEHQLANG
SSKVESSVRP PPSQGGQITG AKKRKSGCVR RFKQDEVAPQ EQGDIRDRTT DKPGNEYVDS
TEGETGDKNK GDDSASHIHN PKIIKIIKPV RYFATVVDGV QQVAISFKAL R
//
