ID K4AMT4_SETIT Unreviewed; 264 AA.
AC K4AMT4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK88844, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQK88844, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK88844,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQK88844}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK88844};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02005579; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K4AMT4; -.
DR STRING; 4555.K4AMT4; -.
DR EnsemblPlants; KQK88844; KQK88844; SETIT_040230mg.
DR Gramene; KQK88844; KQK88844; SETIT_040230mg.
DR eggNOG; ENOG502QRR5; Eukaryota.
DR HOGENOM; CLU_052573_1_0_1; -.
DR InParanoid; K4AMT4; -.
DR OMA; RREWNAE; -.
DR Proteomes; UP000004995; Chromosome IX.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR007275; YTH_domain.
DR PANTHER; PTHR46387:SF13; OS10G0458700 PROTEIN; 1.
DR PANTHER; PTHR46387; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50882; YTH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 148..264
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT DOMAIN 211..264
FT /note="YTH"
FT /evidence="ECO:0000259|PROSITE:PS50882"
SQ SEQUENCE 264 AA; 29123 MW; 6DE7D25225748E24 CRC64;
MEEGSDYYVL RKGDVVAVYK TLRDCQAQIC SSVSGPAASA YKGHAWSREK EEYISSRGLS
NASYVINATE LREDIFGPLV PCSFQEIVGA RSNQPAPNHF GIRNGIAYQT GSQSVDLNHE
ARSSSSRHIS PVNFNHSGAV DAQPVSKQYM VGILHFDGAS KGNPGKAGAG AVLMTEDGRV
ISRLREGLGV VTNNVAEYRG LILGLKYAIR HGFKRIKVHG DSQLVCNQVN GVWQTKHQNM
MELCNEVRRL KENFLSFEIN HVRR
//
