ID K4FQU2_9BRAS Unreviewed; 598 AA.
AC K4FQU2;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 08-NOV-2023, entry version 27.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=34G24.32 {ECO:0000313|EMBL:AFJ66232.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:AFJ66232.1};
RN [1] {ECO:0000313|EMBL:AFJ66232.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22865739; DOI=10.1534/genetics.112.143958;
RA Guo Y.L., Todesco M., Hagmann J., Das S., Weigel D.;
RT "Independent FLC Mutations as Causes of Flowering-Time Variation in
RT Arabidopsis thaliana and Capsella rubella.";
RL Genetics 192:729-739(2012).
RN [2] {ECO:0000313|EMBL:AFJ66232.1}
RP NUCLEOTIDE SEQUENCE.
RA Savar N.S., Jahanian-Najafabadi A., Bouzari S.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; JX003248; AFJ66232.1; -; Genomic_DNA.
DR AlphaFoldDB; K4FQU2; -.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 192..227
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 228..262
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 506..598
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 598 AA; 67721 MW; 4E78FFFFEF808905 CRC64;
MISIIARDFT DEDSRHCNVR EPEKQLQLFD IRLRKTELHS FGWKQDSSES QSALINQSWS
PDGLYITSGS VDPVIHVFDI SELALYIFPS SNYHRMLKQV LESCKTPSNS KCVLQAHAQV
FKLGYGTYPS LLVSMVAAYR RCNLSYFARR LLLWFLSLSP GVSNTNIIIE SLMKTGEYGL
AKKVLRRASD QNVITWNLMI GGYVRNVQYE EALKTLKNML SFSDIKPNKF SFASALAACA
RLGDLHHAKW VHSLMIDAGI ELNTILSSAL VDVYAKCGDI ETSREVFYSV KWNDVSIWNA
MITGFATHGL ATEAIRVFSE MEAEHVSPDS ITFLGILTAC SHCGLLEEGK EFFGLMSQRF
SIQPKLEHYG AMVDLLGRAG QVKEAYDLIE SMPIEPDVVI WRSLLSSART YKNPELGEIA
IQNLSKAKSG DYVLLSNIYS STKKWENAQK VRELMTKEGI RKAKGKSWVE FGGVIHRFKA
GDTSHIDTKA IYKVLEGLIQ KAKSEGFVSD TDLVLMDVSE EEKEENLNYH SEKLALAYVI
LKSSPGSEIR IQKNIRMCSD CHNWIKAVSK LLNRVIIMRD RIRFHRFEDG LCSCKDYW
//