ID K4GQB5_ALLMI Unreviewed; 223 AA.
AC K4GQB5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Brain-derived neurotrophic factor {ECO:0000256|ARBA:ARBA00022282, ECO:0000256|RuleBase:RU364086};
DE Short=BDNF {ECO:0000256|RuleBase:RU364086};
DE Flags: Fragment;
GN Name=BDNF {ECO:0000313|EMBL:AFP24469.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:AFP24469.1};
RN [1] {ECO:0000313|EMBL:AFP24469.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22993238; DOI=10.1098/rsbl.2012.0703;
RA Wiens J.J., Hutter C.R., Mulcahy D.G., Noonan B.P., Townsend T.M.,
RA Sites J.W.Jr., Reeder T.W.;
RT "Resolving the phylogeny of lizards and snakes (Squamata) with extensive
RT sampling of genes and species.";
RL Biol. Lett. 8:1043-1046(2012).
CC -!- FUNCTION: Promotes the survival of neuronal populations that are all
CC located either in the central nervous system or directly connected to
CC it. {ECO:0000256|RuleBase:RU364086}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|RuleBase:RU364086}.
CC -!- SIMILARITY: Belongs to the NGF-beta family.
CC {ECO:0000256|ARBA:ARBA00010783, ECO:0000256|RuleBase:RU364086}.
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DR EMBL; JN654788; AFP24469.1; -; Genomic_DNA.
DR AlphaFoldDB; K4GQB5; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0008083; F:growth factor activity; IEA:UniProtKB-KW.
DR Gene3D; 2.10.90.10; Cystine-knot cytokines; 1.
DR InterPro; IPR020430; Brain-der_neurotrophic_factor.
DR InterPro; IPR029034; Cystine-knot_cytokine.
DR InterPro; IPR020408; Nerve_growth_factor-like.
DR InterPro; IPR002072; Nerve_growth_factor-rel.
DR InterPro; IPR019846; Nerve_growth_factor_CS.
DR PANTHER; PTHR11589:SF12; BRAIN-DERIVED NEUROTROPHIC FACTOR; 1.
DR PANTHER; PTHR11589; NERVE GROWTH FACTOR NGF -RELATED; 1.
DR Pfam; PF00243; NGF; 1.
DR PIRSF; PIRSF001789; NGF; 1.
DR PRINTS; PR01912; BDNFACTOR.
DR PRINTS; PR00268; NGF.
DR SMART; SM00140; NGF; 1.
DR SUPFAM; SSF57501; Cystine-knot cytokines; 1.
DR PROSITE; PS00248; NGF_1; 1.
DR PROSITE; PS50270; NGF_2; 1.
PE 3: Inferred from homology;
KW Growth factor {ECO:0000256|RuleBase:RU364086}.
FT DOMAIN 119..223
FT /note="Nerve growth factor-related"
FT /evidence="ECO:0000259|SMART:SM00140"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFP24469.1"
FT NON_TER 223
FT /evidence="ECO:0000313|EMBL:AFP24469.1"
SQ SEQUENCE 223 AA; 24992 MW; F4C32AE5D63DD268 CRC64;
SCMKAAPMKE ASVRGQGSLA YPGLRTHGTL ESLSGSNAGS RGLTSLADTF EHVIEELLDE
DQDIQPSEEN KDADLYTSRV MLSSQVPLEP PLLFLLEEYK NYLDAANMSM RVRRHSDPAR
RGELSVCDST SEWVTAAEKK TAVDMSGATV TVLEKVPVPK GQLKQYFYET KCNPKGYTKE
GCRGIDKRHW NSQCRTTQSY VRALTMDNKK RVGWRFIRID TSC
//
