ID K4JSQ5_FUSPS Unreviewed; 535 AA.
AC K4JSQ5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 08-NOV-2023, entry version 33.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=RPB1 {ECO:0000313|EMBL:AFU81895.1};
OS Fusarium pseudograminearum (Wheat and barley crown-rot fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium.
OX NCBI_TaxID=101028 {ECO:0000313|EMBL:AFU81895.1};
RN [1] {ECO:0000313|EMBL:AFU81895.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NRRL 28062 {ECO:0000313|EMBL:AFU81895.1};
RX PubMed=23357352; DOI=10.1016/j.fgb.2012.12.004;
RA O'Donnell K., Rooney A.P., Proctor R.H., Brown D.W., McCormick S.P.,
RA Ward T.J., Frandsen R.J., Lysoe E., Rehner S.A., Aoki T., Robert V.A.,
RA Crous P.W., Groenewald J.Z., Kang S., Geiser D.M.;
RT "Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin
RT for a clade comprising all agriculturally and medically important
RT fusaria.";
RL Fungal Genet. Biol. 52:20-31(2013).
RN [2] {ECO:0000313|EMBL:AXN69814.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NRRL 28065 {ECO:0000313|EMBL:AXN69814.1};
RX PubMed=30018869; DOI=10.5598/imafungus.2018.09.01.02;
RA Waalwijk C., Taga M., Zheng S.L., Proctor R.H., Vaughan M.M., O'Donnell K.;
RT "Karyotype evolution in Fusarium.";
RL IMA Fungus 9:13-26(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
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DR EMBL; JX171524; AFU81895.1; -; Genomic_DNA.
DR EMBL; MG282389; AXN69814.1; -; Genomic_DNA.
DR AlphaFoldDB; K4JSQ5; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 6.20.50.80; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR007075; RNA_pol_Rpb1_6.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..130
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 159..261
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT DOMAIN 268..535
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT DOMAIN 334..518
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04992"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFU81895.1"
FT NON_TER 535
FT /evidence="ECO:0000313|EMBL:AFU81895.1"
SQ SEQUENCE 535 AA; 59401 MW; 0D5ED5212113574E CRC64;
FLTKEQIMNC MLWVPNWDGV IPQPAIYKPR PRWTGKQLIS MVIPKEVSIF NGTDSGESAP
LKDEGLLIQA GQLMYGLLTK KSVGASAGGI VHISYNELGP EGAMAFLNGV QQVVTYWLLQ
NGHSIGIGDT IPDAVTIAKV QAHIDDEKAE VARLTAMATA NELEALPGMN VRATFENKVS
MALNQARDKA GTTTQKSLKD SNNAVTMASS GSKGSSINIS QMTALVGQQI VEGKRIPFGF
KYRTLPHFTK DDYSPEARGF VENSYLRGLT PSEFFFHAMA GREGLIDTAV KTAETGYIQR
RLVKALEDLS ARYDGTVRNS LGDIVQFLYG EDGLDAMIIE NQKLGILNMS NTAFEKKYRL
DLANPPEWFK HDYEFGNELT GDRPSMALLD EEWERLVHDR TRIRAINRAK GNEEMMQLPL
NITRIIESAK RVFNVKANDR SNLRPSDVIP AVQNMLDNMK IVRGTDPISL EADANASILF
KGLLRSRLAF KEVVKEHRLN RLAFDHILGE LQNRWDRAFV NPGEMVGVLA AQSIG
//