ID K4KMP0_SIMAS Unreviewed; 743 AA.
AC K4KMP0;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFV00445.1};
GN OrderedLocusNames=M5M_16570 {ECO:0000313|EMBL:AFV00445.1};
OS Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Cellvibrionaceae; Simiduia.
OX NCBI_TaxID=1117647 {ECO:0000313|EMBL:AFV00445.1, ECO:0000313|Proteomes:UP000000466};
RN [1] {ECO:0000313|EMBL:AFV00445.1, ECO:0000313|Proteomes:UP000000466}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21679 / JCM 13881 / BCRC 17597 / SA1
RC {ECO:0000313|Proteomes:UP000000466};
RX PubMed=23405302; DOI=10.1128/genomeA.00039-12;
RA Lin S.Y., Shieh W.Y., Chen J.S., Tang S.L.;
RT "Complete genome sequence of Simiduia agarivorans SA1(T), a marine
RT bacterium able to degrade a variety of polysaccharides.";
RL Genome Announc. 1:E00039-E00039(2013).
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DR EMBL; CP003746; AFV00445.1; -; Genomic_DNA.
DR RefSeq; WP_015048597.1; NZ_ATUQ01000001.1.
DR AlphaFoldDB; K4KMP0; -.
DR STRING; 1117647.M5M_16570; -.
DR KEGG; saga:M5M_16570; -.
DR eggNOG; COG2146; Bacteria.
DR eggNOG; COG2871; Bacteria.
DR eggNOG; COG3239; Bacteria.
DR HOGENOM; CLU_021094_0_0_6; -.
DR OrthoDB; 9800167at2; -.
DR Proteomes; UP000000466; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd03511; Rhizopine-oxygenase-like; 1.
DR CDD; cd03528; Rieske_RO_ferredoxin; 1.
DR Gene3D; 3.40.50.80; Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module; 1.
DR Gene3D; 2.102.10.10; Rieske [2Fe-2S] iron-sulphur domain; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR InterPro; IPR005804; FA_desaturase_dom.
DR InterPro; IPR017927; FAD-bd_FR_type.
DR InterPro; IPR001709; Flavoprot_Pyr_Nucl_cyt_Rdtase.
DR InterPro; IPR039261; FNR_nucleotide-bd.
DR InterPro; IPR001433; OxRdtase_FAD/NAD-bd.
DR InterPro; IPR039393; Rhizopine-oxygenase-like.
DR InterPro; IPR017938; Riboflavin_synthase-like_b-brl.
DR InterPro; IPR017941; Rieske_2Fe-2S.
DR InterPro; IPR036922; Rieske_2Fe-2S_sf.
DR PANTHER; PTHR43644; NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT; 1.
DR PANTHER; PTHR43644:SF1; NAD(P)H-FLAVIN REDUCTASE; 1.
DR Pfam; PF00487; FA_desaturase; 1.
DR Pfam; PF00175; NAD_binding_1; 1.
DR Pfam; PF00355; Rieske; 1.
DR PRINTS; PR00371; FPNCR.
DR SUPFAM; SSF52343; Ferredoxin reductase-like, C-terminal NADP-linked domain; 1.
DR SUPFAM; SSF50022; ISP domain; 1.
DR SUPFAM; SSF63380; Riboflavin synthase domain-like; 1.
DR PROSITE; PS51384; FAD_FR; 1.
DR PROSITE; PS51296; RIESKE; 1.
PE 4: Predicted;
KW FAD {ECO:0000256|ARBA:ARBA00022827};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000000466};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 47..66
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 358..455
FT /note="Rieske"
FT /evidence="ECO:0000259|PROSITE:PS51296"
FT DOMAIN 466..607
FT /note="FAD-binding FR-type"
FT /evidence="ECO:0000259|PROSITE:PS51384"
SQ SEQUENCE 743 AA; 84278 MW; D0D491FFD0B7039E CRC64;
MSARDYSLTG PCGADAQRNG LADAHWYQSP VDKGAMRALL VRKDWPAIRD TLIWFSLLAV
AGYSMVQTWG SAWFLLPFFF YAFLYASVSD SRWHECSHGT AFKTDWMNRA LYEVASFMIL
RESTTWRWSH IRHHTDTIIV GRDPEIASQR PARPLALFLS FFKYPALVTE LRRMLIHACG
QRDQEAATYV PASEWPAIHW KARVYVAVYV GVVALAIVQQ SWLPLMFVGL PSVFGTWLIG
LYGYTQHAGL AENVTDHRLN SRTVLMNPLN RFLYWNMNYH VEHHMYPLVP YHALPALHAL
VKDDCPPAYD GLWAAWKEIL AAWKRQIKDP DYFVRRPLPA PATPAPASEA LAVGHDGWVC
AGNADQIQNA DVLRIDAAGH TYAIYRNQAG DLFATEGICT HGNAHLAEGL VIGDEIECPK
HNGRFALSDG HATRAPACVA LERYPVEQRG EKLWLNTAPY PRIDSIRRWS LRVVAVRNLS
TFIREIELEP QQLVPKFNYQ PGDYLRICVP AYQSLNLNPA QQQGSQSQIW QSLGLHTAKA
FNRQPCMRNY SLATNPVKDE RLVLNVRLAF NPSAPELHLG VGSGYMYSLS EGDVIEAVGP
QGEFRIKHTR AEKIYIGGGA GMAPLKSHLS YLLETEQVSQ PIRFWYGARN HQEALYQDYF
EQLAQKYPNF RFNLVLSEPE SEQDARYPNG FVHQVVEQDF LSKGSDCQQY EFYLCGPPPM
MAATRNLLQK LGVPEQQIAF DEF
//
