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Database: UniProt
Entry: K4LC94_THEPS
LinkDB: K4LC94_THEPS
Original site: K4LC94_THEPS 
ID   K4LC94_THEPS            Unreviewed;       612 AA.
AC   K4LC94;
DT   09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT   09-JAN-2013, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   SubName: Full=Phytochrome-like protein Cph {ECO:0000313|EMBL:AFV10556.1};
GN   Name=cph {ECO:0000313|EMBL:AFV10556.1};
GN   OrderedLocusNames=Tph_c03090 {ECO:0000313|EMBL:AFV10556.1};
OS   Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 26808 / PB).
OC   Bacteria; Bacillota; Clostridia; Thermoanaerobacterales;
OC   Thermoanaerobacteraceae; Thermacetogenium.
OX   NCBI_TaxID=1089553 {ECO:0000313|EMBL:AFV10556.1, ECO:0000313|Proteomes:UP000000467};
RN   [1] {ECO:0000313|EMBL:AFV10556.1, ECO:0000313|Proteomes:UP000000467}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-254 / DSM 26808 / PB
RC   {ECO:0000313|Proteomes:UP000000467};
RX   PubMed=23259483; DOI=10.1186/1471-2164-13-723;
RA   Oehler D., Poehlein A., Leimbach A., Muller N., Daniel R., Gottschalk G.,
RA   Schink B.;
RT   "Genome-guided analysis of physiological and morphological traits of the
RT   fermentative acetate oxidizer Thermacetogenium phaeum.";
RL   BMC Genomics 13:723-723(2012).
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DR   EMBL; CP003732; AFV10556.1; -; Genomic_DNA.
DR   AlphaFoldDB; K4LC94; -.
DR   STRING; 1089553.Tph_c03090; -.
DR   KEGG; tpz:Tph_c03090; -.
DR   eggNOG; COG3290; Bacteria.
DR   eggNOG; COG3706; Bacteria.
DR   HOGENOM; CLU_446131_0_0_9; -.
DR   OMA; DMISHET; -.
DR   Proteomes; UP000000467; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013656; PAS_4.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR45138:SF6; DIGUANYLATE CYCLASE DGCN; 1.
DR   PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR   Pfam; PF13185; GAF_2; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF08448; PAS_4; 1.
DR   SMART; SM00065; GAF; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   4: Predicted;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000467};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        25..46
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        58..78
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        119..137
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          149..190
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          223..274
FT                   /note="PAC"
FT                   /evidence="ECO:0000259|PROSITE:PS50113"
FT   DOMAIN          480..612
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
SQ   SEQUENCE   612 AA;  70500 MW;  3DC82335F4EB425B CRC64;
     MNRRAQMKKD QEQYHKSEQH QKSKTALICH RFFLLALIAT TTGWFFSFKL HPIGKLDLQD
     VIIEGLTLSC ILISYIYILR LKINFLQLGW SLFTLGRLID FFDEFTSEPE LFDTTLEGIL
     VISGLTLVVV GFSRAYSSLK DEIELRKKAQ DELSAIFEAS PVGIIKIDDE FRIERINRAM
     RKILGLKEGE ETLTIGTDVR TIPSVGQAGL DKLFDKYREN KTVVLETPFR SLYGRECYLE
     IAANPIMKNG DFRGAIIVVK DITERKRIEE RINHLENIRR CVLDVMCTII AEKNPEKLLQ
     KACKILTQKR SYIFAWLGMT EKNTKRVIPV AKAGFEDGYL EAVKITWDEA DTGMGPTGRA
     VKTRQPKVVR NTADDPTFEP WRFEAKKRGY ASSAAIPLIY EDEVFGVLNV YSIHPNAFDD
     EEMELLQMLA KSLAHALHSL ETEEKLRKQA IRDGLTGLYN RIYFTERIQK EVERARRYRH
     PLSFVMMDVN NFKEINDRYS HMEGDEVLKE VAETLLNSVR EIDLSFRYGG DEFLLIIPEI
     EESGAQKVVE RIKGKLEVLS EERKSVGKPP VELSFGIATW RPETGEKWEE VLKESDLRMY
     ENKMRKQSPG PA
//
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