ID K4LC94_THEPS Unreviewed; 612 AA.
AC K4LC94;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Phytochrome-like protein Cph {ECO:0000313|EMBL:AFV10556.1};
GN Name=cph {ECO:0000313|EMBL:AFV10556.1};
GN OrderedLocusNames=Tph_c03090 {ECO:0000313|EMBL:AFV10556.1};
OS Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 26808 / PB).
OC Bacteria; Bacillota; Clostridia; Thermoanaerobacterales;
OC Thermoanaerobacteraceae; Thermacetogenium.
OX NCBI_TaxID=1089553 {ECO:0000313|EMBL:AFV10556.1, ECO:0000313|Proteomes:UP000000467};
RN [1] {ECO:0000313|EMBL:AFV10556.1, ECO:0000313|Proteomes:UP000000467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-254 / DSM 26808 / PB
RC {ECO:0000313|Proteomes:UP000000467};
RX PubMed=23259483; DOI=10.1186/1471-2164-13-723;
RA Oehler D., Poehlein A., Leimbach A., Muller N., Daniel R., Gottschalk G.,
RA Schink B.;
RT "Genome-guided analysis of physiological and morphological traits of the
RT fermentative acetate oxidizer Thermacetogenium phaeum.";
RL BMC Genomics 13:723-723(2012).
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DR EMBL; CP003732; AFV10556.1; -; Genomic_DNA.
DR AlphaFoldDB; K4LC94; -.
DR STRING; 1089553.Tph_c03090; -.
DR KEGG; tpz:Tph_c03090; -.
DR eggNOG; COG3290; Bacteria.
DR eggNOG; COG3706; Bacteria.
DR HOGENOM; CLU_446131_0_0_9; -.
DR OMA; DMISHET; -.
DR Proteomes; UP000000467; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR45138:SF6; DIGUANYLATE CYCLASE DGCN; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000467};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..46
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 58..78
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 119..137
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 149..190
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 223..274
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 480..612
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 612 AA; 70500 MW; 3DC82335F4EB425B CRC64;
MNRRAQMKKD QEQYHKSEQH QKSKTALICH RFFLLALIAT TTGWFFSFKL HPIGKLDLQD
VIIEGLTLSC ILISYIYILR LKINFLQLGW SLFTLGRLID FFDEFTSEPE LFDTTLEGIL
VISGLTLVVV GFSRAYSSLK DEIELRKKAQ DELSAIFEAS PVGIIKIDDE FRIERINRAM
RKILGLKEGE ETLTIGTDVR TIPSVGQAGL DKLFDKYREN KTVVLETPFR SLYGRECYLE
IAANPIMKNG DFRGAIIVVK DITERKRIEE RINHLENIRR CVLDVMCTII AEKNPEKLLQ
KACKILTQKR SYIFAWLGMT EKNTKRVIPV AKAGFEDGYL EAVKITWDEA DTGMGPTGRA
VKTRQPKVVR NTADDPTFEP WRFEAKKRGY ASSAAIPLIY EDEVFGVLNV YSIHPNAFDD
EEMELLQMLA KSLAHALHSL ETEEKLRKQA IRDGLTGLYN RIYFTERIQK EVERARRYRH
PLSFVMMDVN NFKEINDRYS HMEGDEVLKE VAETLLNSVR EIDLSFRYGG DEFLLIIPEI
EESGAQKVVE RIKGKLEVLS EERKSVGKPP VELSFGIATW RPETGEKWEE VLKESDLRMY
ENKMRKQSPG PA
//