ID K5VDM5_PHACS Unreviewed; 584 AA.
AC K5VDM5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=PHACADRAFT_247456 {ECO:0000313|EMBL:EKM61086.1};
OS Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus) (Peniophora
OS carnosa).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Polyporales; Phanerochaetaceae; Phanerochaete.
OX NCBI_TaxID=650164 {ECO:0000313|EMBL:EKM61086.1, ECO:0000313|Proteomes:UP000008370};
RN [1] {ECO:0000313|EMBL:EKM61086.1, ECO:0000313|Proteomes:UP000008370}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HHB-10118-sp {ECO:0000313|EMBL:EKM61086.1,
RC ECO:0000313|Proteomes:UP000008370};
RX PubMed=22937793; DOI=10.1186/1471-2164-13-444;
RA Suzuki H., MacDonald J., Syed K., Salamov A., Hori C., Aerts A.,
RA Henrissat B., Wiebenga A., vanKuyk P.A., Barry K., Lindquist E.,
RA LaButti K., Lapidus A., Lucas S., Coutinho P., Gong Y., Samejima M.,
RA Mahadevan R., Abou-Zaid M., de Vries R.P., Igarashi K., Yadav J.S.,
RA Grigoriev I.V., Master E.R.;
RT "Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P.
RT chrysosporium, to elucidate the genetic basis of the distinct wood types
RT they colonize.";
RL BMC Genomics 13:444-444(2012).
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DR EMBL; JH930468; EKM61086.1; -; Genomic_DNA.
DR RefSeq; XP_007390520.1; XM_007390458.1.
DR AlphaFoldDB; K5VDM5; -.
DR STRING; 650164.K5VDM5; -.
DR GeneID; 18914090; -.
DR KEGG; pco:PHACADRAFT_247456; -.
DR HOGENOM; CLU_020551_4_0_1; -.
DR InParanoid; K5VDM5; -.
DR OrthoDB; 5480707at2759; -.
DR Proteomes; UP000008370; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12284; RRM2_RBM23_RBM39; 1.
DR CDD; cd12285; RRM3_RBM39_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR029123; RBM39_linker.
DR InterPro; IPR006509; RBM39_SF.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR NCBIfam; TIGR01622; SF-CC1; 1.
DR PANTHER; PTHR48036:SF6; RNA BINDING MOTIF PROTEIN 39B ISOFORM X1-RELATED; 1.
DR PANTHER; PTHR48036; SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED; 1.
DR Pfam; PF15519; RBM39linker; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SMART; SM00361; RRM_1; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000008370};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 254..334
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 358..436
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 493..577
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..30
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..149
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..173
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..208
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 584 AA; 67460 MW; 674F092B150C3C5B CRC64;
MSSPPNGKMD VDKAVSPDGH SKSSRNHSTE THRTRRSHRS RSRERERDRD RHERRLRDEP
DEKRSRDRRD KDRSRERSHK DKDYDRERDR ERRRESERHR RERGESRHRD RDRDREDREY
RDRRRKRDDT MDDSPEDRLK RKKEDDSTES SLLPPPPASA GLPAPPPPLG DSPRRHPDGS
RDFDRDRRYG DKRRDPRDDY DGASHHRSTS ARLRSPYGSD RKSTPPVRRP SPSYDQSNDD
PLAEEPREDD SEARSVFVSQ LAARLTARDL GYFFEDKLGE GAVMDSRIVT DRISRRSKGI
GYVEFRTIEL VEKAIGLSGT IVMGLPIQVQ HTEAERNRTH AGDSLHLPPG VSSHHGGMQL
YVGSLHFNLT ESDIRQVFEP FGELEFVDLH RDPMTGRSKG YAFVQYKRGE DAKMALEQME
GFELAGRTLR VNTVHEKGNV RYTPQESLDD TGGGNLNAAS RQALMQKLAR TDQPAARPQP
IMKPNIPQSM QSKSVLLKNM FNPEEETERD WDKELADDVK NEVEDKYGDV NFIKVERESQ
GEIYVKFDSI ESAKKAIEGL HGRWFGGRQV SAAFISDAIL QAHQ
//
