ID K6YU06_9ALTE Unreviewed; 270 AA.
AC K6YU06;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:GAC14760.1};
GN ORFNames=GLIP_2132 {ECO:0000313|EMBL:GAC14760.1};
OS Aliiglaciecola lipolytica E3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Aliiglaciecola.
OX NCBI_TaxID=1127673 {ECO:0000313|EMBL:GAC14760.1, ECO:0000313|Proteomes:UP000006334};
RN [1] {ECO:0000313|EMBL:GAC14760.1, ECO:0000313|Proteomes:UP000006334}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E3 {ECO:0000313|EMBL:GAC14760.1,
RC ECO:0000313|Proteomes:UP000006334};
RX PubMed=25009843;
RA Qin Q.-L., Xie B.-B., Yu Y., Shu Y.-L., Rong J.-C., Zhang Y.-J.,
RA Zhao D.-L., Chen X.-L., Zhang X.-Y., Chen B., Zhou B.-C., Zhang Y.-Z.;
RT "Comparative genomics of the marine bacterial genus Glaciecola reveals the
RT high degree of genomic diversity and genomic characteristic for cold
RT adaptation.";
RL Environ. Microbiol. 16:1642-1653(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAC14760.1}.
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DR EMBL; BAEN01000041; GAC14760.1; -; Genomic_DNA.
DR RefSeq; WP_008844576.1; NZ_BAEN01000041.1.
DR AlphaFoldDB; K6YU06; -.
DR STRING; 1127673.GLIP_2132; -.
DR eggNOG; COG1737; Bacteria.
DR OrthoDB; 3237351at2; -.
DR Proteomes; UP000006334; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF18; RPIR-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006334}.
FT DOMAIN 4..80
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
SQ SEQUENCE 270 AA; 30815 MW; 272D418595D18267 CRC64;
MPKSKFVTLI TQSYQQLSPN GRKIANYLQQ NPADVLNLSV AEIAEITLTS KATVSRFFRQ
LGYKNLQQVK DQMRAARSAG MPLAVTHKNN DYITQELERI RQTWENVKPD DITQLVESIS
QASRITLIGF RNSYPVALHF RQQLLQVRGK VRLLPLPGQT LAEEVEDISA DELVIIIAFR
RRPKIVEKLI KLIPKEQLVL MADPSAQIYK DEVNQLFICQ LGQELPLDSY SAPMSVISVI
CNQILNSEKY SKLNRIDAIS NMYKELDELE
//
