ID K7KY18_SOYBN Unreviewed; 455 AA.
AC K7KY18;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100801738 {ECO:0000313|EnsemblPlants:KRH55928};
GN ORFNames=GLYMA_06G290400 {ECO:0000313|EMBL:KRH55928.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH55928.1};
RN [1] {ECO:0000313|EMBL:KRH55928.1, ECO:0000313|EnsemblPlants:KRH55928}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH55928};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH55928.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH55928}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH55928};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH55928.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH55928.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000839; KRH55928.1; -; Genomic_DNA.
DR RefSeq; XP_003526270.1; XM_003526222.3.
DR AlphaFoldDB; K7KY18; -.
DR SMR; K7KY18; -.
DR STRING; 3847.K7KY18; -.
DR PaxDb; 3847-GLYMA06G44476-1; -.
DR EnsemblPlants; KRH55928; KRH55928; GLYMA_06G290400.
DR GeneID; 100801738; -.
DR Gramene; KRH55928; KRH55928; GLYMA_06G290400.
DR KEGG; gmx:100801738; -.
DR eggNOG; KOG0311; Eukaryota.
DR HOGENOM; CLU_025237_1_1_1; -.
DR InParanoid; K7KY18; -.
DR OMA; CISQRAH; -.
DR OrthoDB; 460116at2759; -.
DR Proteomes; UP000008827; Chromosome 6.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16531; RING-HC_RING1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044592; RING1A/B.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46537:SF1; E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED; 1.
DR PANTHER; PTHR46537; OS11G0578200 PROTEIN; 1.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 83..123
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 178..275
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..318
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..28
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..58
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..219
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..318
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 455 AA; 52291 MW; 12CDB603D9EA6E44 CRC64;
MAAQKRSFPD APNDNNRHAK HHHEEAKTEE EEEEEEEEAQ QQQQHDEEEE EEDNNYKSDD
SPPEDKSEYV FVELLEIRKE VQCPICLGII KKTRTVMECL HRFCRECIDK SMRLGNNECP
ACRTHCASRR SLRDDPNYDA LIAALYPNIE KYEQEELEFR EEDKNRNKQI QASIAKVVQR
QSEALVKRRR DTPGSFVTRS QRNQRNVLSR RQNQGMDNQG SEDNEEENDN NEKDSSSTDE
RCTELRQRRR KRRTRGRPSQ PSSSTASPDG GCIESDMDIR ISSRLVSKPQ KLTWGRGGFR
SHTRHGSGNG SNSKSSRSSR LAKLVDYLHS LNENTDELDV HLILLSLDKQ ITPSLQQPHL
CCRPTLSVKH LCEYVAHQTP LLVEEVEILA VKGCCSTVCD KSFDETSSSD ELTTLVIDPS
KDELETLQGH ESLAGIKSKC ISKREHLILA YRRKE
//
