ID K7L312_SOYBN Unreviewed; 534 AA.
AC K7L312;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=HTH OST-type domain-containing protein {ECO:0000259|PROSITE:PS51644};
GN Name=100807418 {ECO:0000313|EnsemblPlants:KRH50304};
GN ORFNames=GLYMA_07G213800 {ECO:0000313|EMBL:KRH50302.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH50304};
RN [1] {ECO:0000313|EMBL:KRH50302.1, ECO:0000313|EnsemblPlants:KRH50304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH50304};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH50302.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH50304}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH50304};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH50302.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH50302.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000840; KRH50302.1; -; Genomic_DNA.
DR EMBL; CM000840; KRH50303.1; -; Genomic_DNA.
DR EMBL; CM000840; KRH50304.1; -; Genomic_DNA.
DR RefSeq; XP_003528513.2; XM_003528465.3.
DR RefSeq; XP_006583886.1; XM_006583823.2.
DR RefSeq; XP_006583887.1; XM_006583824.2.
DR AlphaFoldDB; K7L312; -.
DR SMR; K7L312; -.
DR STRING; 3847.K7L312; -.
DR PaxDb; 3847-GLYMA07G33680-3; -.
DR EnsemblPlants; KRH50302; KRH50302; GLYMA_07G213800.
DR EnsemblPlants; KRH50303; KRH50303; GLYMA_07G213800.
DR EnsemblPlants; KRH50304; KRH50304; GLYMA_07G213800.
DR GeneID; 100807418; -.
DR Gramene; KRH50302; KRH50302; GLYMA_07G213800.
DR Gramene; KRH50303; KRH50303; GLYMA_07G213800.
DR Gramene; KRH50304; KRH50304; GLYMA_07G213800.
DR KEGG; gmx:100807418; -.
DR eggNOG; ENOG502QUA6; Eukaryota.
DR HOGENOM; CLU_022581_0_0_1; -.
DR InParanoid; K7L312; -.
DR OMA; AECEVDD; -.
DR OrthoDB; 3077715at2759; -.
DR Proteomes; UP000008827; Chromosome 7.
DR GO; GO:0005777; C:peroxisome; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0010468; P:regulation of gene expression; IEA:InterPro.
DR CDD; cd08824; LOTUS; 2.
DR CDD; cd10910; PIN_limkain_b1_N_like; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR Gene3D; 3.30.420.610; LOTUS domain-like; 2.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR024768; Marf1.
DR InterPro; IPR021139; NYN.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR PANTHER; PTHR14379; LIMKAIN B LKAP; 1.
DR PANTHER; PTHR14379:SF82; MEIOSIS REGULATOR AND MRNA STABILITY FACTOR 1; 1.
DR Pfam; PF01936; NYN; 1.
DR Pfam; PF12872; OST-HTH; 2.
DR PROSITE; PS51644; HTH_OST; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 314..386
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 459..533
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
SQ SEQUENCE 534 AA; 58512 MW; 322CBF381D360E65 CRC64;
MATPSKSTPI IASDTLEPKG KTMTMTESNA NILQCPLNQQ LHSSLDGPVA ILWDIENCPV
PCDVRPEDVA GNIRMALQVH PVIKGAVMMF SAYGDFNAFP RRLREGCQRT GVKLIDVPNG
RKDAADKAIL VDMFLFALDN PPPSSIMLIS GDVDFAPALH ILGQRGYTVI LVIPANVGVS
SALCNAGKFV WDWPSVVRGE GFVPPSKALV PPRGGPVDLA GYLMGCHIND NSDGQNEEEA
IVYRGMSQSY YNSREFSMVS QSLSEYNCGT SNTTYLPTTM RSHSFPSVLN DAPGGSMMPS
SDLNECQLWV QPGDLNGLKG QLVRLLELSG GCLPLARVPA EYQKLYGRPL YVSEYGAIKL
VNLFKKMGDT MAVEGKGNRK FVYLGNWRTG PSAPPLSLAK KDKKGKGAQE ENMNIVTGGC
SSDEFSDEER VVIEEPDESS CIGKGNQGRA AKCEVDDHFI EQFKYELQEI LVSYSCRIFL
GCFEAIYQQR YKKQLEYQRF GVDKLEGLFE KVSDVVVLHE EPASKKKFLA AVGG
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