ID K7L6G5_SOYBN Unreviewed; 597 AA.
AC K7L6G5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100779822 {ECO:0000313|EnsemblPlants:KRH43144};
GN ORFNames=GLYMA_08G133500 {ECO:0000313|EMBL:KRH43144.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH43144.1};
RN [1] {ECO:0000313|EMBL:KRH43144.1, ECO:0000313|EnsemblPlants:KRH43144}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH43144};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH43144.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH43144}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH43144};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH43144.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH43144.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000841; KRH43144.1; -; Genomic_DNA.
DR RefSeq; XP_006585259.1; XM_006585196.2.
DR AlphaFoldDB; K7L6G5; -.
DR SMR; K7L6G5; -.
DR PaxDb; 3847-GLYMA08G14200-2; -.
DR EnsemblPlants; KRH43144; KRH43144; GLYMA_08G133500.
DR GeneID; 100779822; -.
DR Gramene; KRH43144; KRH43144; GLYMA_08G133500.
DR KEGG; gmx:100779822; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_30_5_1; -.
DR InParanoid; K7L6G5; -.
DR OrthoDB; 443590at2759; -.
DR Proteomes; UP000008827; Chromosome 8.
DR ExpressionAtlas; K7L6G5; baseline and differential.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR PANTHER; PTHR47925:SF91; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 59..93
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 121..155
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 184..218
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 246..280
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 347..381
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 382..416
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 597 AA; 66712 MW; F7A2BC1065DD1C86 CRC64;
MLTSLVPTFW RQRHSFFVLA TLFSSTRDVY HANLDIVALS RAGKVDAARK LFDEMATKDV
VTWNSMLSAY WQNGLLQRSK ALFHSMPLRN VVSWNSIIAA CVQNDNLQDA FRYLAAAPEK
NAASYNAIIS GLARCGRMKD AQRLFEAMPC PNVVSYTAMV DGYARVEGGI GRARALFEAM
PRRNSVSWVV MINGLVENGL CEEAWEVFVR MPQKNDVART AMITGFCKEG RMEDARDLFQ
EIRCRDLVSW NIIMTGYAQN GRGEEALNLF SQMIRTGMQP DDLTFVSVFI ACASLASLEE
GSKAHALLIK HGFDSDLSVC NALITVHSKC GGIVDSELVF GQISHPDLVS WNTIIAAFAQ
HGLYDKARSY FDQMVTVSVQ PDGITFLSLL SACCRAGKVN ESMNLFSLMV DNYGIPPRSE
HYACLVDVMS RAGQLQRACK IINEMPFKAD SSIWGAVLAA CSVHLNVELG ELAARRILNL
DPFNSGAYVM LSNIYAAAGK WKDVHRIRVL MKEQGVKKQT AYSWLQIGNK THYFVGGDPS
HPNINDIHVA LRRITLHMKV KGEIARQCCK KVISPMSYIL VIFSQEDHCK RQTQFDY
//
