ID K7LGJ2_SOYBN Unreviewed; 499 AA.
AC K7LGJ2;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100779301 {ECO:0000313|EnsemblPlants:KRH40813};
GN ORFNames=GLYMA_09G279300 {ECO:0000313|EMBL:KRH40813.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH40813.1};
RN [1] {ECO:0000313|EMBL:KRH40813.1, ECO:0000313|EnsemblPlants:KRH40813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH40813};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH40813.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH40813}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH40813};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH40813.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH40813.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000842; KRH40813.1; -; Genomic_DNA.
DR EMBL; CM000842; KRH40814.1; -; Genomic_DNA.
DR RefSeq; XP_003533674.1; XM_003533626.3.
DR AlphaFoldDB; K7LGJ2; -.
DR SMR; K7LGJ2; -.
DR PaxDb; 3847-GLYMA09G41580-3; -.
DR EnsemblPlants; KRH40813; KRH40813; GLYMA_09G279300.
DR EnsemblPlants; KRH40814; KRH40814; GLYMA_09G279300.
DR GeneID; 100779301; -.
DR Gramene; KRH40813; KRH40813; GLYMA_09G279300.
DR Gramene; KRH40814; KRH40814; GLYMA_09G279300.
DR KEGG; gmx:100779301; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; K7LGJ2; -.
DR OMA; YTMVLNG; -.
DR OrthoDB; 469798at2759; -.
DR Proteomes; UP000008827; Chromosome 9.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF23; PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 188..222
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 223..259
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 295..329
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 330..364
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 365..399
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 400..434
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 499 AA; 56680 MW; FAF9A9D2B9CC169C CRC64;
MVRHPLSKRA NKYLRKFKKW PHSPYKTSWH HNFGEEQAMK NLKQATLEMD SSQHPQRPNL
PCPFLLSTLL DSFKAYSIDP TPKAYFFVLK TLTSTSQLQD IPPVLYHLEH LEKFETPESI
LVYLIRFYGL SDRVQDAVDL FFRIPRFRCT PTVCSLNLVL SLLCRKRDCL EMVPEILLKS
QHMNIRVEES TFRVLIRALC RIKRVGYAIK MLNFMVEDGY GLDEKICSLV ISALCEQKDL
TSAEALVVWR DMRKLGFCPG VMDYTNMIRF LVKEGRGMDA LDILNQQKQD GIKLDVVSYT
MVLSGIVAEG EYVMLDELFD EMLVIGLIPD AYTYNVYING LCKQNNVAEA LQIVASMEEL
GCKPNVVTYN TLLGALSVAG DFVKARELMK EMGWKGVGLN LHTYRIVLDG LVGKGEIGES
CLLLEEMLEK CLFPRSSTFD NIIFQMCQKD LFTEAMELTK KVVAKSFLPG ASTWEALLLN
SGSKLGYSKA TFSGLLGPI
//
