ID K7MEU4_SOYBN Unreviewed; 1845 AA.
AC K7MEU4;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=Clu domain-containing protein {ECO:0000259|PROSITE:PS51823};
GN Name=100784117 {ECO:0000313|EnsemblPlants:KRH06469};
GN ORFNames=GLYMA_16G024600 {ECO:0000313|EMBL:KRH06470.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH06470.1};
RN [1] {ECO:0000313|EMBL:KRH06470.1, ECO:0000313|EnsemblPlants:KRH06469}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH06469};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06470.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH06469}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH06469};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH06470.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06470.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000849; KRH06469.1; -; Genomic_DNA.
DR EMBL; CM000849; KRH06470.1; -; Genomic_DNA.
DR RefSeq; XP_006598903.1; XM_006598840.2.
DR EnsemblPlants; KRH06469; KRH06469; GLYMA_16G024600.
DR EnsemblPlants; KRH06470; KRH06470; GLYMA_16G024600.
DR GeneID; 100784117; -.
DR Gramene; KRH06469; KRH06469; GLYMA_16G024600.
DR Gramene; KRH06470; KRH06470; GLYMA_16G024600.
DR KEGG; gmx:100784117; -.
DR HOGENOM; CLU_001902_0_0_1; -.
DR OrthoDB; 464444at2759; -.
DR Proteomes; UP000008827; Chromosome 16.
DR ExpressionAtlas; K7MEU4; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0051640; P:organelle localization; IEA:UniProt.
DR GO; GO:0006996; P:organelle organization; IEA:InterPro.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR023231; GSKIP_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR PANTHER; PTHR12601:SF17; PROTEIN REDUCED CHLOROPLAST COVERAGE 1; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF13424; TPR_12; 2.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF103107; Hypothetical protein c14orf129, hspc210; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 303..580
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REPEAT 914..947
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 122..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 572..644
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1135..1196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1224..1243
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1338..1362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1391..1415
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1497..1526
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1733..1782
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 572..596
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 608..639
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1145..1163
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1395..1411
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1499..1526
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1743..1782
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1845 AA; 203209 MW; 8C3674C012F3353B CRC64;
MAPRNSRGKP KGEKKKKEEK VLPVVIDITV KLLDETHVLK GISTDRIIDV RRLLSVNTET
CYITNFSLSH EVRGPRLKDT VDVSALKPCL LTLVEEDYDE DRAVAHVRRL LDIVACTTSF
GPSSLPPPKN DSGTVPKSGK PEAPPAKQSA KDAEAAAATV DIEGEISHSC PKLENFYEFF
SLSHLTAPIQ YVKRGSRRRV EEILEEDYLF SLDVKVCNGK VVHVEACRKG FYSVGKQRIL
CHNLVDLLRQ LSRAFDNAFD DLLKAFSERN KFGNLPYGFR ANTWLVPPVA AQSPSYFPPL
PVEDEMWGGN GGGLGRDGKY DLVPWANEFS FIASMPCKTA EERQVRDRKA FLLHSLFVDV
AIFRAIKAIK HVMEEPNFSC SVVENNIIYT ERVGDLNINV LKDGSVASCK IDTKIDGVEA
TGVNQKDLLE RNLMKGITAD ENTAAHDITT LGVINVRYCG YVVVVKVEGG VNENVDSPSQ
QNIELFDQPE GGANALNINS LRLLLHNTTS PENNKPVSQI QTFESEELGA SHAFVEKLIK
ENLAKLEEEE PGIDYFVRWE LGACWVQHLQ DQNNTEKDKK PSSEKAKNEM KVEGLGKPLK
ALKNYKKKSD SSNNNSATEY SKFNREAESS PLPSIESQHE TTEAENELVL KGMLSDEAFT
RLKESGTGLH CKSMHDLIEL SRKYYTDVAL PKLVADFGSL ELSPVDGRTL TDFMHTRGLR
MHSLGHVVKL SEKLSHVQSL CIHEMIVRAF KHILRAVISA VDKEKMASSI AGALNLLLGV
PENRESDKSR EVHPLVWKWL ELFLKKRFDW DLNKLNYKDV KKFAILRGLC HKVGIELVPR
DFDMDSPIPF QKSDIVSLVP VHKQAACSSA DGRQLLESSK TALDKGKLED AVTYGTKALA
KLVAVCGPYH RMTAGAYSLL AVVLYHTGDF NQATIYQQKA LDINERELGL DHPDTMKSYG
DLAVFYYRLQ HTELALKYVK RALYLLHLTC GPSHPNTAAT YINVAMMEEG LGNVHVALRY
LHKALKCNQR LLGADHIQTA ASYHAIAIAL SLMEAYPLSV QHEQTTLQIL RAKLGSDDLR
TQDAAAWLEY FESKAFEQQE AARNGTRKPD ASIASKGHLS VSDLLDYINP NTKGRDAAAK
RRSQITKVRA TSYQNTGMSS SDESSKEIPK EASDEEVQIS EPVGSADSEQ ESNSGPDLEQ
AILKQISDEK LQIYDEIFSE AHAEGEDGWQ SVQRPRSAGS YGRRLKQRRA ALGKVYSYHK
NVEVGTESPF VRSPNPNSRY YFLKKRTISH GSYTDDHTTN ITQGNKFGRK VVKAVTYRVK
SMPSTSKPCA NETLENGDKL LSSLPEPDPI DANPVKNSKV SLGKSPSYKE VALAPPGTIS
KFQVYNPQSE ISVSSEHDSG KHEEEVEANR NVDVDPTLIE VNDTVKEKNN DSLSDSVDDS
LDDTGVAIEG KEETELIVAV QDNCMSAEGQ SGDVKAQGAV DSSILIHAVD DHVDSYKQEL
DTSNSSGSLE PSANTNPISQ GGEDLRVNVS PSSQIRTGGI PYKKLSASAA PFNPSPAIAR
AAPIAMNMTL PSGPRAVPAI GPWPVNMNVH PGPTTVLPAV APMCSSPHHA YPSPPTTPNM
MQPLPFMYPP FTQPQSVSPS NFPVTNSAFH ANHFTYLNPT ISKFGPSAVW PGCHPVEFPL
PVPIVEPIPD PISESQALCH GLESPSSASV LPEDIDNIGD SNQVVKTLSS EISEDEAVRS
GSESIKENGN MNFHGSENAG NKQHQNIASN GNSSSSGTNM DGEKTFSILF RGRRNRKQTL
RMPISLLTRP NGSQSFKVIY NRVVRGSHAP KSMNLSSSKD CTATS
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