ID K7MEW1_SOYBN Unreviewed; 893 AA.
AC K7MEW1;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=GLYMA_16G026000 {ECO:0000313|EMBL:KRH06495.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH06495.1};
RN [1] {ECO:0000313|EMBL:KRH06495.1, ECO:0000313|EnsemblPlants:KRH06495}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH06495};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06495.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH06495}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH06495};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH06495.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06495.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM000849; KRH06495.1; -; Genomic_DNA.
DR AlphaFoldDB; K7MEW1; -.
DR SMR; K7MEW1; -.
DR PaxDb; 3847-GLYMA16G02920-2; -.
DR EnsemblPlants; KRH06495; KRH06495; GLYMA_16G026000.
DR Gramene; KRH06495; KRH06495; GLYMA_16G026000.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_8_1; -.
DR InParanoid; K7MEW1; -.
DR OMA; HNGEYED; -.
DR Proteomes; UP000008827; Chromosome 16.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 196..230
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 297..331
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 415..449
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 450..484
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 485..519
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 586..620
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 801..893
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 893 AA; 100872 MW; F693B3312E66A726 CRC64;
MPPRSHSPSS ISLGMSEAQL VSSPQFSPPK FSPFFHPFGE IRTLNSVREL HAQIIKMPKK
RNLVTMDGSM MRNYLQFGDF ESATKVFFVG FARNYLLWNS FIEEFASFGG DSHEILAVFK
ELHDKGVKFD SKALTVVLKI CLALMELWLG MEVHACLVKR GFHVDVHLSC ALINLYEKYL
GIDGANQVFD ETPLQEDFLW NTIVMANLRS EKWEDALELF RRMQSASAKA TDGTIVKLLQ
ACGKLRALNE GKQIHGYVIR FGRVSNTSIC NSIVSMYSRN NRLELARVAF DSTEDHNSAS
WNSIISSYAV NDCLNGAWDL LQEMESSGGS YENVLTNFRS LQSAGFKPDS CSITSALQAV
IGLGCFNLGK EIHGYIMRSK LEYDVYVCTS LVDKYIKNDC LDKAEVVFHH TKNKNICAWN
SLISGYTYKG LFDNAEKLLN QMKEEGIKPD LVTWNSLVSG YSMSGRSEEA LAVINRIKSL
GLTPNVVSWT AMISGCCQNE NYMDALQFFS QMQEENVKPN STTICTLLRA CAGSSLLKIG
EEIHCFSMRH GFLDDIYIAT ALIDMYGKGG KLKVAHEVFR NIKEKTLPCW NCMMMGYAIY
GHGEEVFTLF DEMRKTGVRP DAITFTALLS GCKNSGLVMD GWKYFDSMKT DYNINPTIEH
YSCMVDLLGK AGFLDEALDF IHAVPQKADA SIWGAVLAAC RLHKDIKIAE IAARNLLRLE
PYNSANYALM MNIYSTFDRW GDVERLKESM TALGVKIPNV WSWIQVKQTI HVFSTEGKSH
PEEGEIYFEL YQLISEIKKL GYVLDINCVH QNIDDSEKEK VLLSHTEKLA MTYGLMKTKG
GSPIRVVKNT RICHDCHTTA KYISLARNRE IFLRDGGRFH HFMNGECSCK DRW
//
