ID K7N0X2_SOYBN Unreviewed; 817 AA.
AC K7N0X2;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100806316 {ECO:0000313|EnsemblPlants:KRG89438};
GN ORFNames=GLYMA_20G023100 {ECO:0000313|EMBL:KRG89438.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG89438.1};
RN [1] {ECO:0000313|EMBL:KRG89438.1, ECO:0000313|EnsemblPlants:KRG89438}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG89438};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG89438.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG89438}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG89438};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG89438.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG89438.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000853; KRG89438.1; -; Genomic_DNA.
DR RefSeq; XP_006605526.1; XM_006605463.2.
DR AlphaFoldDB; K7N0X2; -.
DR SMR; K7N0X2; -.
DR STRING; 3847.K7N0X2; -.
DR PaxDb; 3847-GLYMA20G02830-2; -.
DR EnsemblPlants; KRG89438; KRG89438; GLYMA_20G023100.
DR GeneID; 100806316; -.
DR Gramene; KRG89438; KRG89438; GLYMA_20G023100.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_34_0_1; -.
DR InParanoid; K7N0X2; -.
DR OMA; EYSSHYL; -.
DR OrthoDB; 1215551at2759; -.
DR Proteomes; UP000008827; Chromosome 20.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:1900865; P:chloroplast RNA modification; IEA:EnsemblPlants.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR GO; GO:0008380; P:RNA splicing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47925:SF122; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 347..381
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 447..481
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 548..582
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 649..683
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 750..784
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 817 AA; 92992 MW; 8999632ED7A6BC8E CRC64;
MELRTAILQS SSSLPPRFHT LKPTPDFAFP FSLFVSNPLR LSCFTFVSKD QQHSFPVTAR
DTRAVLNCIS EGLSCTGASS GDCSCDDKRD DDEDAMGFLN NYEMIIRDCD KLIEAFMVDE
RNWRRLLVFN KKWNNIRPHF FRHCQDKADT EDNPVTKNKL LWLGKKLKEI DQELQGHNEL
IEMIKGNPSK ICEIVSSSRK DFTKEFFMHL HTIAESYGYN LERQNDLLKL WNTCLAAVKV
YDAATESIEA LNAAELNFQD IIKSPPDAFC WKIDNLAEKS QCFNPELVAH WLRLCYNMEE
VGRVHTIVLK FFIHPVTYVD NNLICSYLRL GKLAQARRVF DGMSRKNTVT WTAIIDGYLK
FNLDDEAFKL FQDCVKHGVP ANSKMFVCIM NLCGRRVDLE LGKQIHARIL KSRWRNLIVD
NAVVHFYAKC GNISSAFRAF DCMAERDVIC WTTMITACSQ QGFGHEALSM LSQMLSDGFY
PNEYTICSAL KACGENKALK FGTQLHGAII KKICKSDVFI GTSLVDMYAK CGVMVDSKVV
FDRMRIRNTA TWTSIISGYA RNGFGEEATS FFRLMKMKRI HVNKLTVLSV LMACGTIKSL
LFGREVHAQI IKSNIHTNIY VGSTLVWFYC KCKEYSYAFK VLQYMPFRDV VSWTAIISGC
ARLGLEHEAL EFLQEMMEEG VLPNSYTYSS ALKACAELEA PIQGKLIHSY ASKTPASSNV
FVNSALIYMY SKCGYVADAF QVFDNMPERN VVSWESMILA YARNGHAREA LKLMHRMQAE
GFVVDDYIHT TVISACGGVE HGDIHQDSEY SSHYLHS
//
