ID K8GGL1_9CYAN Unreviewed; 1408 AA.
AC K8GGL1;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
DE Flags: Precursor;
GN ORFNames=OsccyDRAFT_4409 {ECO:0000313|EMBL:EKQ66621.1};
OS Leptolyngbyaceae cyanobacterium JSC-12.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Leptolyngbyales; Leptolyngbyaceae.
OX NCBI_TaxID=864702 {ECO:0000313|EMBL:EKQ66621.1, ECO:0000313|Proteomes:UP000001332};
RN [1] {ECO:0000313|EMBL:EKQ66621.1, ECO:0000313|Proteomes:UP000001332}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JSC-12 {ECO:0000313|EMBL:EKQ66621.1,
RC ECO:0000313|Proteomes:UP000001332};
RG DOE Joint Genome Institute;
RA Brown I., Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Tapia R.,
RA Chen A., Kyrpides N., Mavromatis K., Markowitz V., Szeto E., Ivanova N.,
RA Mikhailova N., Ovchinnikova G., Pagani I., Pati A., Goodwin L.,
RA Nordberg H.P., Cantor M.N., Hua S.X., Woyke T.;
RT "Improved high quality draft of Oscillatoriales sp. JSC-12.";
RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKQ66621.1}.
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DR EMBL; AJUB01000019; EKQ66621.1; -; Genomic_DNA.
DR STRING; 864702.OsccyDRAFT_4409; -.
DR PATRIC; fig|864702.5.peg.4728; -.
DR eggNOG; COG0584; Bacteria.
DR eggNOG; COG2931; Bacteria.
DR eggNOG; COG4222; Bacteria.
DR HOGENOM; CLU_001601_0_0_3; -.
DR OrthoDB; 384721at2; -.
DR Proteomes; UP000001332; Chromosome.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08602; GDPD_ScGlpQ1_like; 2.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR Gene3D; 2.150.10.10; Serralysin-like metalloprotease, C-terminal; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR018511; Hemolysin-typ_Ca-bd_CS.
DR InterPro; IPR001343; Hemolysn_Ca-bd.
DR InterPro; IPR027372; Phytase-like_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR InterPro; IPR011049; Serralysin-like_metalloprot_C.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 2.
DR Pfam; PF00353; HemolysinCabind; 1.
DR Pfam; PF13449; Phytase-like; 2.
DR PRINTS; PR00313; CABNDNGRPT.
DR SUPFAM; SSF51120; beta-Roll; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
DR PROSITE; PS00330; HEMOLYSIN_CALCIUM; 2.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000001332};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 183..533
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 563..929
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 1408 AA; 152533 MW; 151E0E0EDB1B78B9 CRC64;
MADTVILKGF AVLPADTFAA GPPSGNFITG STNGRTIPFS SQPVQGFSAV QFAGNNTFWF
MPDNGFGAKN NSADYLLRVY RVDPNFRGIE AGDGSVNVLS FIQLADPDKR VPFQIINQTT
SDRLLTGGDF DLESFVIAKD GTLWFGEEFG PFLLNTDATG KVLSAPIATP NYFNIPTLNG
KPPLVIGHRG ASGELPEHTI EAYRLAILRG ADFIEPDLVA TKDGVLIARH EPTLGTTTDV
ASRPEFANRR RSGIIDGVLY ENEFFASDFT LAEIKTLRAI MPQGYRTNAF DGVFQIPTLE
DVINLVKQVE ADTGKKIGIY PETKHPTYHD QLGLSLEEPL LETLERTGFT DPTRVFIQSF
EVSNLKKLST KTNIPLVQLL DAFDVDYNTG ELLYLDVNAR PYDFTVNGDT RTYADLQTPE
GLAEIATYAA GIGPWKRMIV SVRNVDNNND GQPDDLNNDG VINDADRVTL PPSSLIANAH
KQGLFVHAYT FRNEGRFLAS NYNNNPELEY RQFIQLGVDG YFTDFPGTGD LVRDQITGSF
VRSPQDPGVL SKPRFNTLNG QTPLVLGHRG ASGDRPEHTL AAYKKAIADG ADFIEPDLVV
TKDGVLIARH EPMLGVVQLN ADGTIRRDAN GNPVLNTTDT STDVYLRPEF ANRLTVKRLD
GNLVGGWFAE DFTLAEVKQL NAIERLPALR STAFDKDGLK VPTLAEVIAL VKEVEASTGR
KIGIYPETKH PTFFQDQGYN TSQLLIDTLT ANNFTDPSRI FIQSFEVSNL KALNNTIMPA
AGVNIPLIQL FGGSGRPYDF VVSGDPRTYT DLSTPAGLAE IATYAAGIGP NKQRIVPLFT
VDRNGDGQPD DLNGDGVISD GDRVTGTPTT LVQDAHRAGL LVHVYTLRNE SFFLPASYNG
DPNAEYRQLI DLGVDGFFTD FSRTGHSVIV NDYLAGTGFI GGGQQYYGDL IVSNLGGSRG
YEGMAINPDK SRIYPLLEGT VIGDPAGALR IYEFDPARGQ FTGLVGYYKM ENPNHAIGDF
AVINDNEYLV IERDGGQAAA AQFKKIFKVD LSRRDASGFV QKVEVANLLN IQDPDDLNRD
GSTIYRMPFV TIENVLVLDN KTILVANDNN YPFSIGRPPA IDDNEIVVLE LSQSLNLDPR
GGNRTFLIDK GERGVEITNF QTVGTGVFPG TTAIAEADVL KFRGVGLTAT NLLLTQQGAD
LLVSFEGDTT TVLLKNTRLE TIDNLTQATG ASTNLGNILF DGDTVIRDSF DVFNADWNFG
QVFNRNTTTF LNDLDNDIRG FDNSNDVING QGGNDILRGL SGSDTLRGGA GNDTLIGGIG
SDVLVGNSGA DVFVLEAGGG TDIIRDFRLA EGDRIGLSGL TFGALTIAQG SGNNASDTLI
RLTSTNEVLA IVAGVQANTL TSSAFVTV
//
