ID K9D3C4_9FIRM Unreviewed; 350 AA.
AC K9D3C4;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN ORFNames=HMPREF9282_01894 {ECO:0000313|EMBL:EKU77676.1};
OS Veillonella seminalis ACS-216-V-Col6b.
OC Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae;
OC Veillonella.
OX NCBI_TaxID=883156 {ECO:0000313|EMBL:EKU77676.1, ECO:0000313|Proteomes:UP000009891};
RN [1] {ECO:0000313|EMBL:EKU77676.1, ECO:0000313|Proteomes:UP000009891}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACS-216-V-Col6b {ECO:0000313|EMBL:EKU77676.1,
RC ECO:0000313|Proteomes:UP000009891};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Saerens B., Vaneechoutte M.,
RA Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A.,
RA Larimer J., McCowen C., Montmayeur A., Murphy C., Neiman D., Pearson M.,
RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Veillonella ratti ACS-216-V-COL6B.";
RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKU77676.1}.
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DR EMBL; AHAF01000020; EKU77676.1; -; Genomic_DNA.
DR RefSeq; WP_006556779.1; NZ_JH992938.1.
DR AlphaFoldDB; K9D3C4; -.
DR PATRIC; fig|883156.3.peg.1851; -.
DR eggNOG; COG2826; Bacteria.
DR HOGENOM; CLU_035706_0_2_9; -.
DR OrthoDB; 1632013at2; -.
DR Proteomes; UP000009891; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033563; transpos_IS30; 1.
DR PANTHER; PTHR10948; TRANSPOSASE; 1.
DR PANTHER; PTHR10948:SF23; TRANSPOSASE INSI FOR INSERTION SEQUENCE ELEMENT IS30A-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
FT DOMAIN 183..344
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 350 AA; 40269 MW; FB63979B305D35F9 CRC64;
MDSINHNTSL RTNKHLSYEE RFFIEKQLQA GVSKTAIANA LGRSRTTIQS EIQRGSVEQI
KAGKRVLMYL ADYGQLNYEK TRQGSFNTRK AGIISPFLTW VEEQVLVHKW SLDAAVGYAL
RKCLFVRNEM VSTKTLYNYL HEGLLRIKPM DLPLVLRRST RKSNTRKHKK NLGKSIDLRD
ESILTREEFG HWELDTVRGI KDKHDEVIIS LLECKTRAYV TLRSPSAKAA DIKNTLESWL
LSFSTHDSLQ QLCKTITADN GLEFASITEL ETEYLQVFFA HPYAAWERGS NERHNGLLRR
IIPKGTAIRD VSEVTLRRAT DWCNALPRKI LNYRTPQEVF IEEVNKVLGS
//