ID K9D6M2_9FIRM Unreviewed; 271 AA.
AC K9D6M2;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE RecName: Full=HTH iclR-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=HMPREF9282_00638 {ECO:0000313|EMBL:EKU78841.1};
OS Veillonella seminalis ACS-216-V-Col6b.
OC Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae;
OC Veillonella.
OX NCBI_TaxID=883156 {ECO:0000313|EMBL:EKU78841.1, ECO:0000313|Proteomes:UP000009891};
RN [1] {ECO:0000313|EMBL:EKU78841.1, ECO:0000313|Proteomes:UP000009891}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACS-216-V-Col6b {ECO:0000313|EMBL:EKU78841.1,
RC ECO:0000313|Proteomes:UP000009891};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Saerens B., Vaneechoutte M.,
RA Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A.,
RA Larimer J., McCowen C., Montmayeur A., Murphy C., Neiman D., Pearson M.,
RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Veillonella ratti ACS-216-V-COL6B.";
RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKU78841.1}.
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DR EMBL; AHAF01000003; EKU78841.1; -; Genomic_DNA.
DR RefSeq; WP_006555538.1; NZ_JH992936.1.
DR AlphaFoldDB; K9D6M2; -.
DR STRING; 883156.HMPREF9282_00638; -.
DR PATRIC; fig|883156.3.peg.622; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_6_3_9; -.
DR OrthoDB; 9791752at2; -.
DR Proteomes; UP000009891; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 23..84
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 85..266
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 271 AA; 30364 MW; 779FB6FDDB4AFFF4 CRC64;
MPSSNSIQRD ALNTDTAPSP TQHKPTLRVI KILEAVAASN GLTLSQIAAR LECPKSTLTP
ILKTLVENNY LLCEEDTLIY TIGKQAFIIG NTYQHNSDIL TLIKDQMEVM SSLCKETIHL
GVLEGNQIMY LQKVNSPKPL QLISSVGKRL PAYATALGKA LLFDHSLDEL RELFPNSLPP
LTEKTIPTVD ALYQDIHKDP NGEFTYEEEE ITKYARCIAM PLRVNNNIAA ALSISFIIFD
ASPEHISNIK YILRRFGTVI KKLMETKNFQ Y
//
