ID K9DFM0_9BURK Unreviewed; 825 AA.
AC K9DFM0;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU82081.1};
GN ORFNames=HMPREF9710_02621 {ECO:0000313|EMBL:EKU82081.1};
OS Massilia timonae CCUG 45783.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Telluria group; Massilia.
OX NCBI_TaxID=883126 {ECO:0000313|EMBL:EKU82081.1, ECO:0000313|Proteomes:UP000009874};
RN [1] {ECO:0000313|EMBL:EKU82081.1, ECO:0000313|Proteomes:UP000009874}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCUG 45783 {ECO:0000313|EMBL:EKU82081.1,
RC ECO:0000313|Proteomes:UP000009874};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Huys G., Walker B., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S.,
RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A.,
RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Massilia timonae CCUG 45783.";
RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKU82081.1}.
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DR EMBL; AGZI01000031; EKU82081.1; -; Genomic_DNA.
DR AlphaFoldDB; K9DFM0; -.
DR STRING; 47229.LO55_3309; -.
DR PATRIC; fig|883126.3.peg.2646; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_20_4; -.
DR Proteomes; UP000009874; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 2.10.70.100; -; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 2.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009874}.
FT DOMAIN 91..142
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 143..213
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 260..332
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 337..389
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 425..563
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 572..825
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 825 AA; 92190 MW; 24B415B2CCE6E13A CRC64;
MPPPTTRPAL APRSTLGDRF DFLQRVAQVG LWEMRVRDRR LYVSDEMRTL FGICADAPDP
DFATLFTRVH PDDQHSVEAQ IAHALQYGTP LDMEHRVVWP DGAVRHVHAR GDLMHGRDGE
PAYYGSVQDV TERHTAEQAN VRLARRLCAT LESITDVFYT VDREWRFTYL NSEAEQLFGR
PRAGLLGKVL WDEFPELGAP PAREELRRAM RERCTVAFDD FHAALQLYCE VRAYPSETGL
AVYMRDITLQ KLTEDALRQS EERLRIVARV TSDAIWDLDV RTDTLWFGAS LHELFGYAPD
EFQASLSLWM DRIHPDDRQR VIARFDHALH GGSDVHWSDD YRFIRKDGSV AHVHDRAQIL
RDGDGTALRV VGAVIDVSER HAADLHIRYL AFHDTLTRLP NRAFLTERLE AALAAARSDT
GGDARRKALL LIDLDNFKTL NETLGHAVGD RLLQQMAIRL VAGLPSDVVA ARFGGDEFGV
LLENLPADKE QACAQAKHEG ERINYLLNQP VQLDGYWLQL GASIGITVFS DDAVDAGDLL
RRADLAMYRA KAAGRGTVRF FDPSLQAAAA ARLTLENDLR AGLRDHAFFL HYQPQVERDG
RIVGVEALVR WRHPKRGTVS PVEFIPLAEE TGLALPLGHW VLERACRQLS DWAGQAETAH
LEISVNVSAR QLHHPAFVAQ VLGCLGPSGA DPRKLKLEIT EGSLLDDIED AIGKINALKA
HGLTFAIDDF GTGYSSLAYL KRLPLDMLKI DRSFVLDLTT NPNDAVIART IIALGASLGL
KVLAEGVETE DQRDFLFANG CQAYQGYLCA RPLEAQALAG MLRKR
//
