ID K9GHW6_PEND1 Unreviewed; 608 AA.
AC K9GHW6;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=SnRNP assembly factor {ECO:0008006|Google:ProtNLM};
GN ORFNames=PDIP_12410 {ECO:0000313|EMBL:EKV20832.1};
OS Penicillium digitatum (strain Pd1 / CECT 20795) (Green mold).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.
OX NCBI_TaxID=1170230 {ECO:0000313|EMBL:EKV20832.1, ECO:0000313|Proteomes:UP000009886};
RN [1] {ECO:0000313|Proteomes:UP000009886}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pd1 / CECT 20795 {ECO:0000313|Proteomes:UP000009886};
RX PubMed=23171342; DOI=10.1186/1471-2164-13-646;
RA Marcet-Houben M., Ballester A.-R., de la Fuente B., Harries E.,
RA Marcos J.F., Gonzalez-Candelas L., Gabaldon T.;
RT "Genome sequence of the necrotrophic fungus Penicillium digitatum, the main
RT postharvest pathogen of citrus.";
RL BMC Genomics 13:646-646(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKV20832.1}.
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DR EMBL; AKCU01000091; EKV20832.1; -; Genomic_DNA.
DR RefSeq; XP_014537854.1; XM_014682368.1.
DR AlphaFoldDB; K9GHW6; -.
DR GeneID; 26229564; -.
DR KEGG; pdp:PDIP_12410; -.
DR HOGENOM; CLU_016848_2_1_1; -.
DR OrthoDB; 719409at2759; -.
DR Proteomes; UP000009886; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR CDD; cd02669; Peptidase_C19M; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR033809; USP39.
DR InterPro; IPR028889; USP_dom.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001607; Znf_UBP.
DR PANTHER; PTHR21646:SF16; U4_U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 2; 1.
DR PANTHER; PTHR21646; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR Pfam; PF00443; UCH; 1.
DR Pfam; PF02148; zf-UBP; 1.
DR SMART; SM00290; ZnF_UBP; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50235; USP_3; 1.
DR PROSITE; PS50271; ZF_UBP; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00502}.
FT DOMAIN 101..198
FT /note="UBP-type"
FT /evidence="ECO:0000259|PROSITE:PS50271"
FT DOMAIN 223..597
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 1..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 608 AA; 67583 MW; 2E49AAD73E9AF779 CRC64;
MSKRHAELPL EQNFSGSPVS KKARVEDDND PDSRNGAAPA YPTSGEELRQ DRNGVDIQGA
AEIEGEELEE AEKDPSGFSD IDEDVTALSA PKRQSAPMEG YGDLYLDTIN REILDFDFEK
LCSISLSNIN VYACLVCGKY FQGRGPKSHA YFHALEVGHH VFINIGTKKV YVLPEGYEVN
NKSLEDIKYV VDPHYTKNQV IKLDKEVHDA WDLSGSRYRP GFVGMNNIKA NDYVNVVAQL
LAHVLPIRNF FLLHEFPTPG TPEIILRFST LVRKLWNPKA FRSHVSPHEL LQEIALRSSK
RFTLTNQADP VDFLSWFLNC LHLALGGSKK PSSTPTSVVH AAFQGRVRIE SQAITAHSDT
QNARLVFTES GTINSQVTPF LILTLDLPPT PLFQSANRES SIPQVPLTTL LNKYNGYTAS
EKLAHRVRHR LLHPLPPYLF FHIKRFSKNR FVSERNPTIV TFPSPHNLDM SPYVEPNPNI
CSPGEPILYD LVANIILDPA IAAPGAMDEA VDKGVNAASG SGGSSSGAGG GSEKVSWLVQ
LHDKAMEAEN TRAKNGGSTE KQMQGPEWLE IQDLFVKRAE SETLFTREGY LMVWERRKVP
GNKGKGRA
//
