ID K9V8Y1_9CYAN Unreviewed; 1303 AA.
AC K9V8Y1;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=Cal6303_4802 {ECO:0000313|EMBL:AFZ03700.1};
OS Calothrix sp. PCC 6303.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Calotrichaceae;
OC Calothrix.
OX NCBI_TaxID=1170562 {ECO:0000313|EMBL:AFZ03700.1, ECO:0000313|Proteomes:UP000010477};
RN [1] {ECO:0000313|EMBL:AFZ03700.1, ECO:0000313|Proteomes:UP000010477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 6303 {ECO:0000313|EMBL:AFZ03700.1,
RC ECO:0000313|Proteomes:UP000010477};
RA Gugger M., Coursin T., Rippka R., Tandeau De Marsac N., Huntemann M.,
RA Wei C.-L., Han J., Detter J.C., Han C., Tapia R., Chen A., Kyrpides N.,
RA Mavromatis K., Markowitz V., Szeto E., Ivanova N., Pagani I., Pati A.,
RA Goodwin L., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T., Kerfeld C.A.;
RT "Finished chromosome of genome of Calothrix sp. PCC 6303.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; CP003610; AFZ03700.1; -; Genomic_DNA.
DR STRING; 1170562.Cal6303_4802; -.
DR KEGG; calt:Cal6303_4802; -.
DR PATRIC; fig|1170562.3.peg.5259; -.
DR eggNOG; COG0584; Bacteria.
DR eggNOG; COG2931; Bacteria.
DR eggNOG; COG4222; Bacteria.
DR HOGENOM; CLU_001601_0_0_3; -.
DR OrthoDB; 384721at2; -.
DR Proteomes; UP000010477; Chromosome.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08602; GDPD_ScGlpQ1_like; 2.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR Gene3D; 2.150.10.10; Serralysin-like metalloprotease, C-terminal; 2.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR001343; Hemolysn_Ca-bd.
DR InterPro; IPR027372; Phytase-like_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR InterPro; IPR011049; Serralysin-like_metalloprot_C.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 2.
DR Pfam; PF00353; HemolysinCabind; 3.
DR Pfam; PF13449; Phytase-like; 2.
DR SUPFAM; SSF51120; beta-Roll; 2.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000010477};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 180..530
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 560..903
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 1303 AA; 141389 MW; BC906DD9FE144707 CRC64;
MANVTLKGFA TLPADTFAAG PQSGKGISAN GRTGLFPGQP VQGFSGVQFA NENEFWFMAD
NGFGAKTNSS DFLLRIYKVN PSFRGIENGD GTVQVGNFIQ LADPDKKATF KITNEGTSER
LLTGADFDIE SFNIAKDNTI WIGDEFGPYL LHFDTTGKLL EAPIPTPNIV KLNTLNGEAP
LVIGHRGASG ELPEHTLAAY KLAIDRGADF IEPDLVATKD GILVARHEPN IINTTDVADR
PEFANRKTTK IVDGVAEEGF FVSDFTLAEL KTIRAKMPQD FRTQAFNGVL EIPTLDEIIN
LVKQEEALTG KKIGIYPETK HPTYHDSLGL SLEEKLVDTL VKNNFTDPKR VFIQSFETSN
LKELHSEIMP KAGIDIPLVQ LFDAADVRLD GSLIEVQPYD FVVNGDSRTY ADLRTREGLQ
EIASYADGIG PWKRMIVSVK GVDSNNDGIA DDVNKDGVVN DADKTTLPPT SLVNDAHKAG
LQVHPYTFRN EGRYLAKDYN GNPELEYQQF INLGVDGYFT DFPGTGDLVR DQIVSPFVRS
PQNADVLKSN EFKTLDKNPP IVIGHRGASG DRPEHTLAAY KLAIASGADF IEPDLVVTKD
GILVARHENA LAILNADGSL NNTDTSTDVY ERPEFANRLT TKVIDGRSVK GWFAEDFTLA
ELKTLNAIER LPALRGTRFN NDKLQVPTLD EIIDLVQQVE KETGRKIGIY PETKHPTYFA
TEGKYIDGTP INVSLGQKLI DTLVAQNFTD PKRVFIQSFE ISNLQELNDV IMPQAKVDLP
LVQLFGGASD RPYDFRVKND PRTYGDLTKP AELTDIAKYA AGIGPNKRLI VPAGSDGKLL
APTTLIQDAH SAGLLVHLYT LRSEPVFLAS EYKGNPVNEY KQFIELGVDG FFTDFPGLGD
TIRDLYAGKP PVSNLGGSRG FEGMAISPDK TKLYPLLEGT VVGDAPGSLR IYDFDIATKQ
YQGLVGYYQM ESSTNAIGDF AVINANEYLV IERDNNQGDA AKFKKIFKVD FSQKDANGFV
AKEEIANLLN IQDPNDLNQD GSTTFEFPFV TIEDVLVIDE NTILVANDNN YPFSLGRPPA
IDNNEILILG LDKPLKVDPR VGIAGQNLPK IEILGTKGDD VLYGSNLDEL FDAGEGNNTI
YGNEGKNIFI AGNGNNIAYG GSSDDVFFFG KGNNVIYGNE GINKITTSSG NNLIYGGSQG
DVIYTGAGND VIYANGGNNV ISSGTGNDTV YTGSGADKFI LDAGTGSATI IGYGANDQIS
RGSTLAANSV LSVTITGNDT LISAGGDLLA TLKDVQLKSV SII
//