ID   L0ANK2_9VIRU            Unreviewed;       239 AA.
AC   L0ANK2;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN   Name=CP {ECO:0000313|EMBL:AFZ75353.1};
OS   Rice yellow mottle virus.
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC   Sobelivirales; Solemoviridae; Sobemovirus.
OX   NCBI_TaxID=31744 {ECO:0000313|EMBL:AFZ75353.1};
RN   [1] {ECO:0000313|EMBL:AFZ75353.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Mg59 {ECO:0000313|EMBL:AFZ75353.1};
RX   PubMed=23123216; DOI=10.1016/j.virusres.2012.10.023;
RA   Rakotomalala M., Pinel-Galzi A., Mpunami A., Randrianasolo A.,
RA   Ramavovololona P., Rabenantoandro Y., Fargette D.;
RT   "Rice yellow mottle virus in Madagascar and in the Zanzibar Archipelago;
RT   Island systems and evolutionary time scale to study virus emergence.";
RL   Virus Res. 0:0-0(2012).
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; JX961570; AFZ75353.1; -; Genomic_RNA.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:AFZ75353.1};
KW   Virion {ECO:0000313|EMBL:AFZ75353.1}.
FT   DOMAIN          35..208
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
FT   REGION          1..48
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..16
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   239 AA;  26050 MW;  3BF4E3D90E0348D5 CRC64;
     MGRKGKKINS NQNQQGKKKS RRPRGRSAEP QLQRAPVAQA SRISGTVPGP LSSNTWPVHS
     VEFLMDFKRS ATSADAVAFN CVPFNLPRVW SLARCYSLWK PTRWDVVYLP EVSAATAGSI
     EMCYLYDYAD AIPSDTGKMS RTAGFVTSSV WYGAEGCHLL NGGSTRNAVV ASMDCSRVGW
     RRVTSSIPSS VDPNVVNTIL PARLAVRSSI KPTVDDVPGK LYAIVSMVLR DPVDPTLNT
//