ID L0JYM0_9EURY Unreviewed; 536 AA.
AC L0JYM0;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Putative DNA binding protein {ECO:0000313|EMBL:AGB37836.1};
GN ORFNames=Natoc_2050 {ECO:0000313|EMBL:AGB37836.1};
OS Natronococcus occultus SP4.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronococcus.
OX NCBI_TaxID=694430 {ECO:0000313|EMBL:AGB37836.1, ECO:0000313|Proteomes:UP000010878};
RN [1] {ECO:0000313|EMBL:AGB37836.1, ECO:0000313|Proteomes:UP000010878}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SP4 {ECO:0000313|EMBL:AGB37836.1,
RC ECO:0000313|Proteomes:UP000010878};
RG DOE Joint Genome Institute;
RA Eisen J., Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Tapia R.,
RA Chen A., Kyrpides N., Mavromatis K., Markowitz V., Szeto E., Ivanova N.,
RA Mikhailova N., Ovchinnikova G., Pagani I., Pati A., Goodwin L.,
RA Nordberg H.P., Cantor M.N., Hua S.X., Woyke T., Eisen J., Klenk H.-P.,
RA Klenk H.-P.;
RT "FINISHED of Natronococcus occultus SP4, DSM 3396.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003929; AGB37836.1; -; Genomic_DNA.
DR RefSeq; WP_015321280.1; NC_019974.1.
DR AlphaFoldDB; L0JYM0; -.
DR STRING; 694430.Natoc_2050; -.
DR GeneID; 14405134; -.
DR KEGG; nou:Natoc_2050; -.
DR eggNOG; arCOG02276; Archaea.
DR eggNOG; arCOG06796; Archaea.
DR HOGENOM; CLU_010057_3_0_2; -.
DR OrthoDB; 205707at2157; -.
DR Proteomes; UP000010878; Chromosome.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR031803; BAT_GAF/HTH-assoc.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR007050; HTH_bacterioopsin.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR34236; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR34236:SF1; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR Pfam; PF15915; BAT; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF04967; HTH_10; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000010878};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 153..306
FT /note="GAF"
FT /evidence="ECO:0000259|SMART:SM00065"
SQ SEQUENCE 536 AA; 58487 MW; 0F695178AFACF06B CRC64;
MDEDGQSGEG TSLVAHDDPD AVQTILDGLP DGVYVLEEEG GGLINERVVE LLGTDRADAE
AVDRLRSLFG SAHERALERQ EPVTADVYDP VTDAWLETHI EPAGTSVTGC LRDVGERKEH
DRRVDQQRER MEGLRGVYSV MRAINGVIVT DATRDELERI TCETLADEPG YEFAFVAAVD
SGSGNIVRRA EAGVEGYVDR IPLSTDPDDP AGRGPAGRAI RSQQLQVSND VLADPDFEPW
REEARELGYR SAAAIPIVHE GGLYGVLGVA GTNRNAFTDQ VAEGLGQLGD VLGHAIAAIE
RKRALMSDQL IELEYEIADG VGVFDGPSMD GHRVDFERVV QVDDDRFLEF GVTAAETFPK
LETLADCIPH WKGVEPIDES AGEVTFELEI ASPPMFSVVA SHGGYVESAA LEAGDYRVTV
HLPESADVRA VTEAIREVYP EATNVARRQV TPSEDSIAQL QDHLYGVLTD RQRTVLETAY
YAGFFEWPRH SSGEEIAETL GITPATFHEH LRSAQHKIVA AVFNEPNTTR AGSERE
//
