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Database: UniProt
Entry: L0L6H1_9PLVG
LinkDB: L0L6H1_9PLVG
Original site: L0L6H1_9PLVG 
ID   L0L6H1_9PLVG            Unreviewed;       141 AA.
AC   L0L6H1;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=Env polyprotein {ECO:0000256|ARBA:ARBA00029888};
DE   Flags: Fragment;
GN   Name=env {ECO:0000313|EMBL:AGB56660.1};
OS   Human immunodeficiency virus.
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus;
OC   Primate lentivirus group.
OX   NCBI_TaxID=12721 {ECO:0000313|EMBL:AGB56660.1};
RN   [1] {ECO:0000313|EMBL:AGB56660.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=HJ162 {ECO:0000313|EMBL:AGB56660.1};
RX   PubMed=23254130; DOI=10.1128/JCM.02792-12;
RA   Etienne L., Eymard-Duvernay S., Aghokeng A., Butel C., Monleau M.,
RA   Peeters M.;
RT   "Single Real-Time Reverse Transcription-PCR Assay for Detection and
RT   Quantification of Genetically Diverse HIV-1, SIVcpz, and SIVgor Strains.";
RL   J. Clin. Microbiol. 51:787-798(2013).
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004202};
CC       Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004202}. Cell
CC       membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane
CC       protein {ECO:0000256|ARBA:ARBA00004251}. Host cell membrane
CC       {ECO:0000256|ARBA:ARBA00004505}; Peripheral membrane protein
CC       {ECO:0000256|ARBA:ARBA00004505}. Host cell membrane
CC       {ECO:0000256|ARBA:ARBA00004402}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004402}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004170}; Peripheral membrane protein
CC       {ECO:0000256|ARBA:ARBA00004170}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004479}. Virion membrane
CC       {ECO:0000256|ARBA:ARBA00004650}; Peripheral membrane protein
CC       {ECO:0000256|ARBA:ARBA00004650}. Virion membrane
CC       {ECO:0000256|ARBA:ARBA00004563}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004563}.
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DR   EMBL; KC005727; AGB56660.1; -; Genomic_DNA.
DR   GO; GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR   GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 1.10.287.210; -; 1.
DR   Gene3D; 1.20.5.490; Single helix bin; 1.
DR   InterPro; IPR000328; GP41-like.
DR   Pfam; PF00517; GP41; 1.
DR   SUPFAM; SSF58069; Virus ectodomain; 1.
PE   4: Predicted;
KW   Cleavage on pair of basic residues {ECO:0000256|ARBA:ARBA00022685};
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Host cell membrane {ECO:0000256|ARBA:ARBA00022511};
KW   Host membrane {ECO:0000256|ARBA:ARBA00022870};
KW   Host-virus interaction {ECO:0000256|ARBA:ARBA00022581};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Viral envelope protein {ECO:0000313|EMBL:AGB56660.1};
KW   Virion {ECO:0000256|ARBA:ARBA00022844}.
FT   DOMAIN          6..139
FT                   /note="Retroviral envelope protein GP41-like"
FT                   /evidence="ECO:0000259|Pfam:PF00517"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AGB56660.1"
FT   NON_TER         141
FT                   /evidence="ECO:0000313|EMBL:AGB56660.1"
SQ   SEQUENCE   141 AA;  16967 MW;  59352BEE03838244 CRC64;
     GIVQQQDNLL RAIQAQQQLL RLSVWGIRQL RARLLALETL IQNQQLLNSW GCKGRLVCYT
     SVKWNTTTWP GNESIWDHLT WQQWDQQVDN VSSTIYDEIQ RAQILQEENE RKLLELDEWA
     SIWNWLDITK WLWYIKIFIM V
//
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