ID L1N8K9_9BACT Unreviewed; 348 AA.
AC L1N8K9;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Transcription antitermination factor NusB {ECO:0000313|EMBL:EKX99609.1};
GN ORFNames=HMPREF9151_01629 {ECO:0000313|EMBL:EKX99609.1};
OS Hoylesella saccharolytica F0055.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Hoylesella.
OX NCBI_TaxID=1127699 {ECO:0000313|EMBL:EKX99609.1, ECO:0000313|Proteomes:UP000010433};
RN [1] {ECO:0000313|EMBL:EKX99609.1, ECO:0000313|Proteomes:UP000010433}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0055 {ECO:0000313|EMBL:EKX99609.1,
RC ECO:0000313|Proteomes:UP000010433};
RA Weinstock G., Sodergren E., Lobos E.A., Fulton L., Fulton R., Courtney L.,
RA Fronick C., O'Laughlin M., Godfrey J., Wilson R.M., Miner T., Farmer C.,
RA Delehaunty K., Cordes M., Minx P., Tomlinson C., Chen J., Wollam A.,
RA Pepin K.H., Bhonagiri V., Zhang X., Suruliraj S., Warren W., Mitreva M.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKX99609.1}.
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DR EMBL; AMEP01000099; EKX99609.1; -; Genomic_DNA.
DR RefSeq; WP_009162934.1; NZ_KB291003.1.
DR AlphaFoldDB; L1N8K9; -.
DR STRING; 1127699.HMPREF9151_01629; -.
DR PATRIC; fig|1127699.3.peg.1504; -.
DR HOGENOM; CLU_058797_0_0_10; -.
DR OrthoDB; 9787568at2; -.
DR Proteomes; UP000010433; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR NCBIfam; TIGR01951; nusB; 1.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000010433};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 201..296
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
FT REGION 310..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 348 AA; 41017 MW; 29D182A980BD6344 CRC64;
MINRELIRIK IVQLTYAYYQ NSNKNMDNAE KELLFSLSKA YDLYNYLLAL IVAITNEERH
RIEIITQQAE REGTEVPSQK FILNKFAVQL EENKMLTSFM ETFKQRWEDD IEAVRKLCNQ
VEQTEAYQEY MVSDDSSYEA DRELWRKLYK QLIQDNSDLD ALLEEKSLYW NDDKEIVDTF
VLKTIKRFEP DNGDQQELLP EYKDVEDRDF AQRLFRAAIL NADQYQRYMS ENSRNWDFSR
LAYMDVVIMQ IAIAEMLTFS NIPVSVTINE YVDLAKLYST SRSGGYINGM LDTIARGLIS
SGKLLKVMPE PRVKRDAPVE DKKPVEQKDE TEIKEENNEN INNEENKV
//
